RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TEPPQ6URK8 271 aa16.88■□□□□ 0.29
LRRK1-208ENST00000532029 BTNL8Q6UX41 500 aa16.88■□□□□ 0.29
LRRK1-208ENST00000532029 OR2K2Q8NGT1 345 aa16.88■□□□□ 0.29
LRRK1-208ENST00000532029 TMEM147Q9BVK8 224 aa16.88■□□□□ 0.29
LRRK1-208ENST00000532029 UQCC1Q9NVA1 299 aa16.88■□□□□ 0.29
LRRK1-208ENST00000532029 SMPXQ9UHP9 88 aa16.88■□□□□ 0.29
LRRK1-208ENST00000532029 LYL1P12980 280 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 NPPCP23582 126 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 RPL12P30050 165 aaKnown RBP16.87■□□□□ 0.29
LRRK1-208ENST00000532029 KRTAP10-11P60412 298 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 NHLH2Q02577 135 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 LCN12Q6JVE5 192 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 Q6ZNX1 250 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 NARS2Q96I59 477 aaKnown RBP16.87■□□□□ 0.29
LRRK1-208ENST00000532029 MLXQ9UH92 298 aa16.87■□□□□ 0.29
LRRK1-208ENST00000532029 IGHV3-49A0A0A0MS15 119 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 CFDP00746 253 aaPredicted RBP16.86■□□□□ 0.29
LRRK1-208ENST00000532029 CD300EQ496F6 205 aaPredicted RBP16.86■□□□□ 0.29
LRRK1-208ENST00000532029 CYP2G1PQ6ZSU1 146 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 BPIFCQ8NFQ6 507 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 OR2T35Q8NGX2 323 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 RNF125Q96EQ8 232 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 PBDC1Q9BVG4 233 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 RHPN1-AS1Q9BWJ2 59 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 TMEM231Q9H6L2 316 aa16.86■□□□□ 0.29
LRRK1-208ENST00000532029 ZNF256Q9Y2P7 627 aaPredicted RBP16.86■□□□□ 0.29
LRRK1-208ENST00000532029 LYZP61626 148 aa16.85■□□□□ 0.29
LRRK1-208ENST00000532029 OR5C1Q8NGR4 320 aa16.85■□□□□ 0.29
LRRK1-208ENST00000532029 SELENOKQ9Y6D0 94 aa16.85■□□□□ 0.29
LRRK1-208ENST00000532029 IGHV3OR16-13A0A075B7E8 117 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 IGHV3-74A0A0B4J1X5 117 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 UBE2L5PA0A1B0GUS4 154 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 WI2-2373I1.2A0A1W2PRP0 233 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 A0A1W2PS18 150 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 CHEK1O14757 476 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 HNRNPCP07910 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
LRRK1-208ENST00000532029 NUP62P37198 522 aaPredicted RBP16.84■□□□□ 0.29
LRRK1-208ENST00000532029 SELENOTP62341 195 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 RAB31Q13636 194 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 USF2Q15853 346 aaPredicted RBP16.84■□□□□ 0.29
LRRK1-208ENST00000532029 VWC2Q2TAL6 325 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 CHAC2Q8WUX2 184 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 RABAC1Q9UI14 185 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 HSPB11Q9Y547 144 aa16.84■□□□□ 0.29
LRRK1-208ENST00000532029 CRYBB3P26998 211 aa16.83■□□□□ 0.28
LRRK1-208ENST00000532029 CLINT1Q14677 625 aa16.83■□□□□ 0.28
LRRK1-208ENST00000532029 Q5BKY6 102 aa16.83■□□□□ 0.28
LRRK1-208ENST00000532029 LAMTOR1Q6IAA8 161 aa16.83■□□□□ 0.28
LRRK1-208ENST00000532029 RBPMS2Q6ZRY4 209 aaKnown RBP16.83■□□□□ 0.28
LRRK1-208ENST00000532029 PFDN2Q9UHV9 154 aa16.83■□□□□ 0.28
LRRK1-208ENST00000532029 WDR83OSQ9Y284 106 aa16.83■□□□□ 0.28
LRRK1-208ENST00000532029 LSM4Q9Y4Z0 139 aaKnown RBP16.83■□□□□ 0.28
LRRK1-208ENST00000532029 TRAV25A0A0B4J276 109 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 IZUMO1RA6ND01 250 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 APOHP02749 345 aaPredicted RBP16.82■□□□□ 0.28
LRRK1-208ENST00000532029 PRB2P02812 416 aaPredicted RBP16.82■□□□□ 0.28
LRRK1-208ENST00000532029 GP9P14770 177 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 GATA2P23769 480 aaPredicted RBP16.82■□□□□ 0.28
LRRK1-208ENST00000532029 DEFA6Q01524 100 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 ZNF546Q86UE3 836 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 ST8SIA2Q92186 375 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 GRAMD2BQ96HH9 432 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 VSIRQ9H7M9 311 aa16.82■□□□□ 0.28
LRRK1-208ENST00000532029 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
LRRK1-208ENST00000532029 FXYD6-FXYD2A0A087WZ82 144 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 IGHV3-66A0A0C4DH42 116 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 AGPAT2O15120 278 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 EIF2B2P49770 351 aaKnown RBP16.81■□□□□ 0.28
LRRK1-208ENST00000532029 GUCA2BQ16661 112 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 TMEM182Q6ZP80 229 aaPredicted RBP16.81■□□□□ 0.28
LRRK1-208ENST00000532029 TMEM61Q8N0U2 210 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 PRR25Q96S07 402 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 RNF2Q99496 336 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 MGST2Q99735 147 aa16.81■□□□□ 0.28
LRRK1-208ENST00000532029 DFFBO76075 338 aa16.8■□□□□ 0.28
LRRK1-208ENST00000532029 FGF7P21781 194 aa16.8■□□□□ 0.28
LRRK1-208ENST00000532029 CAMLGP49069 296 aa16.8■□□□□ 0.28
LRRK1-208ENST00000532029 PPP1R14BQ96C90 147 aa16.8■□□□□ 0.28
LRRK1-208ENST00000532029 SMIM3Q9BZL3 60 aa16.8■□□□□ 0.28
LRRK1-208ENST00000532029 MPDU1O75352 247 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 CD5P06127 495 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 LINC00869P0C866 280 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 ORM2P19652 201 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 INO80EQ8NBZ0 244 aaPredicted RBP16.79■□□□□ 0.28
LRRK1-208ENST00000532029 OR1B1Q8NGR6 318 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 ATP5SQ99766 215 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 SLC45A2Q9UMX9 530 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 U3KQE9 123 aa16.79■□□□□ 0.28
LRRK1-208ENST00000532029 NOTCH1P46531 2555 aa16.78■□□□□ 0.28
LRRK1-208ENST00000532029 hCG_2014768A0A024R1R8 64 aa16.78■□□□□ 0.28
LRRK1-208ENST00000532029 S100A7P31151 101 aa16.78■□□□□ 0.28
LRRK1-208ENST00000532029 TCF24Q7RTU0 167 aa16.78■□□□□ 0.28
LRRK1-208ENST00000532029 AQP10Q96PS8 301 aa16.78■□□□□ 0.28
LRRK1-208ENST00000532029 ZNF785A8K8V0 405 aa16.77■□□□□ 0.28
LRRK1-208ENST00000532029 IFNA5P01569 189 aa16.77■□□□□ 0.28
LRRK1-208ENST00000532029 GGTLC1Q9BX51 225 aa16.77■□□□□ 0.28
LRRK1-208ENST00000532029 DOK5Q9P104 306 aa16.77■□□□□ 0.28
LRRK1-208ENST00000532029 MEGF8Q7Z7M0 2845 aa16.77■□□□□ 0.27
LRRK1-208ENST00000532029 SMLR1H3BR10 107 aa16.76■□□□□ 0.27
LRRK1-208ENST00000532029 TSPAN4O14817 238 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms