RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ADARB2-AS1A8MUL3 147 aa14.64□□□□□ -0.07
SMPD1-205ENST00000531303 TOMM40O96008 361 aa14.64□□□□□ -0.07
SMPD1-205ENST00000531303 ELLP55199 621 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-205ENST00000531303 YPEL3P61236 119 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-205ENST00000531303 NDUFA11Q86Y39 141 aa14.64□□□□□ -0.07
SMPD1-205ENST00000531303 STOML3Q8TAV4 291 aa14.64□□□□□ -0.07
SMPD1-205ENST00000531303 Q8WTZ3 238 aa14.64□□□□□ -0.07
SMPD1-205ENST00000531303 GNPNAT1Q96EK6 184 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-205ENST00000531303 DOK5Q9P104 306 aa14.64□□□□□ -0.07
SMPD1-205ENST00000531303 PUS1Q9Y606 427 aaKnown RBP eCLIP14.64□□□□□ -0.07
SMPD1-205ENST00000531303 LINC00869P0C866 280 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 LYZP61626 148 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 RELQ04864 619 aaPredicted RBP14.63□□□□□ -0.07
SMPD1-205ENST00000531303 RPEL1Q2QD12 228 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 FFAR4Q5NUL3 377 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 ZNF600Q6ZNG1 722 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 C3orf56Q8N813 242 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 OR2G3Q8NGZ4 309 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 TMED6Q8WW62 240 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 RAX2Q96IS3 184 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 CITED1Q99966 193 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 PBDC1Q9BVG4 233 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 COL6A5A8TX70 2615 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 ZNF320A2RRD8 509 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 LINC01619G3V211 115 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 RPL29P47914 159 aaKnown RBP14.63□□□□□ -0.07
SMPD1-205ENST00000531303 SLURP1P55000 103 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 B2MP61769 119 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 SELENOTP62341 195 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 OR51G1Q8NGK1 321 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 RCC1LQ96I51 464 aaKnown RBP14.63□□□□□ -0.07
SMPD1-205ENST00000531303 ZNF414Q96IQ9 312 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 C20orf24Q9BUV8 137 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 SLC39A9Q9NUM3 307 aa14.63□□□□□ -0.07
SMPD1-205ENST00000531303 CCL24O00175 119 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 ZNF207O43670 478 aaKnown RBP14.62□□□□□ -0.07
SMPD1-205ENST00000531303 TSPAN15O95858 294 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 IL4P05112 153 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 ORM2P19652 201 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 HOXD3P31249 432 aaPredicted RBP14.62□□□□□ -0.07
SMPD1-205ENST00000531303 PRR20EP86478 221 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 PRR20CP86479 221 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 PRR20DP86480 221 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 PRR20BP86481 221 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 PRR20AP86496 221 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 TOMM20LQ6UXN7 152 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 OR1B1Q8NGR6 318 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 KCNIP2Q9NS61 270 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 TIMM9Q9Y5J7 89 aa14.62□□□□□ -0.07
SMPD1-205ENST00000531303 CFDP00746 253 aaPredicted RBP14.61□□□□□ -0.07
SMPD1-205ENST00000531303 SPP1P10451 314 aa14.61□□□□□ -0.07
SMPD1-205ENST00000531303 GCSAMLQ5JQS6 135 aa14.61□□□□□ -0.07
SMPD1-205ENST00000531303 PSMG3Q9BT73 122 aaPredicted RBP14.61□□□□□ -0.07
SMPD1-205ENST00000531303 ZP3P21754 424 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 SYNJ2BPP57105 145 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 FAM106AQ4KMX7 169 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 UNQ9165/PRO28630Q6UXU0 137 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 Q6ZRG5 221 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 RNF125Q96EQ8 232 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 ZNF747Q9BV97 191 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 VSIRQ9H7M9 311 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 STAB1Q9NY15 2570 aa14.6□□□□□ -0.07
SMPD1-205ENST00000531303 NDUFA4O00483 81 aa14.59□□□□□ -0.07
SMPD1-205ENST00000531303 OR5G3P0C626 314 aa14.59□□□□□ -0.07
SMPD1-205ENST00000531303 ALKAL2Q6UX46 152 aa14.59□□□□□ -0.07
SMPD1-205ENST00000531303 PLA2G2EQ9NZK7 142 aa14.59□□□□□ -0.07
SMPD1-205ENST00000531303 WI2-2373I1.2A0A1W2PRP0 233 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 HYPMO75409 117 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 SEC11BP0C7V7 166 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 RAB2AP61019 212 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 USF2Q15853 346 aaPredicted RBP14.58□□□□□ -0.08
SMPD1-205ENST00000531303 FAM74A1Q5RGS3 127 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 GPHB5Q86YW7 130 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 MDFIQ99750 246 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 ZFAND3Q9H8U3 227 aa14.58□□□□□ -0.08
SMPD1-205ENST00000531303 COX7A2P2O60397 106 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 SERF2P84101 59 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 AKR1C8PQ5T2L2 129 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 EIF5AL1Q6IS14 154 aaKnown RBP14.57□□□□□ -0.08
SMPD1-205ENST00000531303 IGHV3-49A0A0A0MS15 119 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 KLF5Q13887 457 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-205ENST00000531303 ACOT6Q3I5F7 207 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-205ENST00000531303 TM4SF20Q53R12 229 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 PATE2Q6UY27 113 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 TMEM37Q8WXS4 190 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 TMEM190Q8WZ59 177 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 DLX4Q92988 240 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-205ENST00000531303 UHRF2Q96PU4 802 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 DNAJC4Q9NNZ3 241 aa14.57□□□□□ -0.08
SMPD1-205ENST00000531303 EIF3GO75821 320 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMPD1-205ENST00000531303 PF4P02776 101 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 FHL3Q13643 280 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 C10orf113Q5VZT2 155 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 FAM122CQ6P4D5 195 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 C1QL4Q86Z23 238 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 OR10G4Q8NGN3 311 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 OR10G9Q8NGN4 311 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 OR10G7Q8NGN6 311 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 OR1L4Q8NGR5 311 aa14.56□□□□□ -0.08
SMPD1-205ENST00000531303 RABAC1Q9UI14 185 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms