RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SMCO1Q147U7 214 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 LYZL2Q7Z4W2 148 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 SOSTQ9BQB4 213 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
CPSF1-205ENST00000531042 C11orf94C9JXX5 98 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 FAM90A26D6RGX4 464 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 H3BMQ9 156 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 PSG1P11464 419 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 AKR1C4P17516 323 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 LGI3Q8N145 548 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 DTD1Q8TEA8 209 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 SLIRPQ9GZT3 109 aaKnown RBP11.43□□□□□ -0.58
CPSF1-205ENST00000531042 RBKSQ9H477 322 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 SEPSECSQ9HD40 501 aaKnown RBP11.43□□□□□ -0.58
CPSF1-205ENST00000531042 NRN1Q9NPD7 142 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 MCUBQ9NWR8 336 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 APLNQ9ULZ1 77 aa11.43□□□□□ -0.58
CPSF1-205ENST00000531042 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
CPSF1-205ENST00000531042 IGLL5B9A064 214 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 TNFSF8P32971 234 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
CPSF1-205ENST00000531042 PRR20EP86478 221 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 PRR20CP86479 221 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 PRR20DP86480 221 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 PRR20BP86481 221 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 PRR20AP86496 221 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 SIGLEC15Q6ZMC9 328 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 TBC1D24Q9ULP9 559 aa11.42□□□□□ -0.58
CPSF1-205ENST00000531042 FABP12A6NFH5 140 aa11.41□□□□□ -0.58
CPSF1-205ENST00000531042 SRPXP78539 464 aa11.41□□□□□ -0.58
CPSF1-205ENST00000531042 KLF9Q13886 244 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-205ENST00000531042 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
CPSF1-205ENST00000531042 H3BMM0 161 aa11.4□□□□□ -0.58
CPSF1-205ENST00000531042 ANXA3P12429 323 aa11.4□□□□□ -0.58
CPSF1-205ENST00000531042 GPX4P36969 197 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-205ENST00000531042 ATP5IP56385 69 aaPredicted RBP11.4□□□□□ -0.58
CPSF1-205ENST00000531042 GAMTQ14353 236 aa11.4□□□□□ -0.58
CPSF1-205ENST00000531042 Q6ZTC4 211 aa11.4□□□□□ -0.58
CPSF1-205ENST00000531042 C1QTNF4Q9BXJ3 329 aa11.4□□□□□ -0.58
CPSF1-205ENST00000531042 DNAH6Q9C0G6 4158 aa11.4□□□□□ -0.58
CPSF1-205ENST00000531042 IGKV1D-37A0A075B6S9 117 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 TRAV10A0A0B4J240 114 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 ZFP92A6NM28 416 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 NUP62P37198 522 aaPredicted RBP11.39□□□□□ -0.59
CPSF1-205ENST00000531042 NUTF2P61970 127 aaKnown RBP11.39□□□□□ -0.59
CPSF1-205ENST00000531042 ZNF90Q03938 601 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 OR8G2PQ6IF36 304 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 OR1S1Q8NH92 325 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 PBDC1Q9BVG4 233 aa11.39□□□□□ -0.59
CPSF1-205ENST00000531042 PIGBOS1A0A0B4J2F0 54 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 PITX3O75364 302 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 HLA-DRB4P13762 266 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 NKX2-1P43699 371 aaPredicted RBP11.38□□□□□ -0.59
CPSF1-205ENST00000531042 CENPSQ8N2Z9 138 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 MCFD2Q8NI22 146 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 SLC35E1Q96K37 410 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 XCL2Q9UBD3 114 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 PFDN2Q9UHV9 154 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 CELA1Q9UNI1 258 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 HLA-DRB4X5D2U9 266 aa11.38□□□□□ -0.59
CPSF1-205ENST00000531042 FAUP35544 74 aaKnown RBP11.37□□□□□ -0.59
CPSF1-205ENST00000531042 TMEM128Q5BJH2 165 aa11.37□□□□□ -0.59
CPSF1-205ENST00000531042 TMED4Q7Z7H5 227 aa11.37□□□□□ -0.59
CPSF1-205ENST00000531042 TRIM63Q969Q1 353 aa11.37□□□□□ -0.59
CPSF1-205ENST00000531042 WDR12Q9GZL7 423 aaKnown RBP11.37□□□□□ -0.59
CPSF1-205ENST00000531042 HECTD4Q9Y4D8 3996 aa11.37□□□□□ -0.59
CPSF1-205ENST00000531042 IGHV4-4A0A075B6R2 117 aa11.36□□□□□ -0.59
CPSF1-205ENST00000531042 C12orf74Q32Q52 190 aa11.36□□□□□ -0.59
CPSF1-205ENST00000531042 C1orf194Q5T5A4 169 aa11.36□□□□□ -0.59
CPSF1-205ENST00000531042 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
CPSF1-205ENST00000531042 LRTM2Q8N967 370 aa11.36□□□□□ -0.59
CPSF1-205ENST00000531042 SNRPGP15A8MWD9 76 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 FABP1P07148 127 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 IAPPP10997 89 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 SLC25A6P12236 298 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 AP3S2P59780 193 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 DEFB1P60022 68 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 LYZP61626 148 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 RAB11AP62491 216 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 PYDC2Q56P42 97 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 LINC00299Q6ZSB3 139 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 TOMM5Q8N4H5 51 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 LINC00052Q96N35 136 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 TRGV9Q99603 122 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 RNF126Q9BV68 326 aa11.35□□□□□ -0.59
CPSF1-205ENST00000531042 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-205ENST00000531042 IGKV1OR2-108A0A075B7D4 117 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 DEFB131BA0A096LNP1 70 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 SOCS3O14543 225 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 VAMP1P23763 118 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 ID1P41134 155 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 PSMB3P49720 205 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 OR2F1Q13607 317 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 ZNF705AQ6ZN79 300 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-205ENST00000531042 ZNF767PQ75MW2 155 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 THAP8Q8NA92 274 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms