RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CRYM-AS1A6NIL9 109 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 ZFP92A6NM28 416 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 PSG1P11464 419 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 MRPS10P82664 201 aaKnown RBP11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 TMEM170AQ8WVE7 144 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 PPP1R14BQ96C90 147 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 RTBDNQ9BSG5 229 aaPredicted RBP11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 PRR13Q9NZ81 148 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 CACFD1Q9UGQ2 172 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
CHMP4A-204ENST00000530996 KIAA1109Q2LD37 5005 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 TMEM189A5PLL7 270 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 BUB3O43684 328 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 IFNA21P01568 189 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 AKAIN1P0CW23 69 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 HTN3P15516 51 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 ID1P41134 155 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 DEFB1P60022 68 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 LYZP61626 148 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 SSBP1Q04837 148 aaKnown RBP11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 NMSQ5H8A3 153 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 OR4B1Q8NGF8 309 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 OR4C16Q8NGL9 310 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 SLC35E1Q96K37 410 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 RFNGQ9Y644 331 aa11.35□□□□□ -0.59
CHMP4A-204ENST00000530996 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 IL18Q14116 193 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 CTF1Q16619 201 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 GDF5OSQ5U4N7 250 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 OR8G2PQ6IF36 304 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 LGI3Q8N145 548 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 SMIM4Q8WVI0 70 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 PRRT1Q99946 306 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 AGRNO00468 2067 aa11.34□□□□□ -0.59
CHMP4A-204ENST00000530996 FABP1P07148 127 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 KLF9Q13886 244 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 ZNF705AQ6ZN79 300 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 FOXI2Q6ZQN5 318 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 OR51S1Q8NGJ8 323 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 MIXL1Q9H2W2 232 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 U3KQ87 197 aa11.33□□□□□ -0.6
CHMP4A-204ENST00000530996 A0A1B0GVY2 172 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 ZNF705FA8MVS1 300 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 ZNF705DP0CH99 300 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 ZNF705BP0CI00 300 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 PSMB3P49720 205 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 CCR6P51684 374 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 SMCO1Q147U7 214 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 OR1S1Q8NH92 325 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 NEU1Q99519 415 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 WDR12Q9GZL7 423 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 RBKSQ9H477 322 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 SAV1Q9H4B6 383 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 MCUBQ9NWR8 336 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 GPR132Q9UNW8 380 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 TMEM56-RWDD3S4R434 201 aa11.32□□□□□ -0.6
CHMP4A-204ENST00000530996 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 RTL8CO15255 209 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 HBE1P02100 147 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 AKR1C4P17516 323 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 SUPT4H1P63272 117 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 ZNF90Q03938 601 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 OR2F1Q13607 317 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 NIPSNAP3BQ9BS92 247 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 SLC35B3Q9H1N7 401 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 HSPB7Q9UBY9 170 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 SCP2D1Q9UJQ7 156 aa11.31□□□□□ -0.6
CHMP4A-204ENST00000530996 LOC102723971A0A1B0GUV8 181 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 CTDSP2O14595 271 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 ANXA3P12429 323 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 OR8I2Q8N0Y5 310 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 DIRAS2Q96HU8 199 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 SCGB3A2Q96PL1 93 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 TMEM208Q9BTX3 173 aa11.3□□□□□ -0.6
CHMP4A-204ENST00000530996 A0A0B4J2A0 478 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 F6UB75 175 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 SMIM18P0DKX4 95 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 SRPXP78539 464 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 PSG9Q00887 426 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 GAMTQ14353 236 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 LYZL2Q7Z4W2 148 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 GPR141Q7Z602 305 aa11.29□□□□□ -0.6
CHMP4A-204ENST00000530996 ZNF709Q8N972 641 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms