RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 A0A1W2PS18 150 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 ZNF207O43670 478 aaKnown RBP11.56□□□□□ -0.56
CCS-206ENST00000530961 CST7O76096 145 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 CD5P06127 495 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 GIPP09681 153 aaPredicted RBP11.56□□□□□ -0.56
CCS-206ENST00000530961 EDN2P20800 178 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 ZNF90Q03938 601 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 TMEM217Q8N7C4 229 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 MLXQ9UH92 298 aa11.56□□□□□ -0.56
CCS-206ENST00000530961 IGSF23A1L1A6 192 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 CHEK1O14757 476 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 CRYBB3P26998 211 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 BAXQ07812 192 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 FGL1Q08830 312 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 SLC38A11Q08AI6 406 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 LAMTOR1Q6IAA8 161 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 BTNL8Q6UX41 500 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 THAP6Q8TBB0 222 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 NARS2Q96I59 477 aaKnown RBP11.55□□□□□ -0.56
CCS-206ENST00000530961 TMEM231Q9H6L2 316 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
CCS-206ENST00000530961 PFDN2Q9UHV9 154 aa11.55□□□□□ -0.56
CCS-206ENST00000530961 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 IL4P05112 153 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 GP9P14770 177 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 RAP2BP61225 183 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 RBPMS2Q6ZRY4 209 aaKnown RBP11.54□□□□□ -0.56
CCS-206ENST00000530961 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 UQCC1Q9NVA1 299 aa11.54□□□□□ -0.56
CCS-206ENST00000530961 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
CCS-206ENST00000530961 LYL1P12980 280 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 SELENOTP62341 195 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 EWSR1Q01844 656 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCS-206ENST00000530961 RAB31Q13636 194 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 VWC2Q2TAL6 325 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 CYP2G1PQ6ZSU1 146 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 RNF125Q96EQ8 232 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 TMEM147Q9BVK8 224 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 MBD2Q9UBB5 411 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
CCS-206ENST00000530961 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 PRB2P02812 416 aaPredicted RBP11.52□□□□□ -0.57
CCS-206ENST00000530961 HNRNPCP07910 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCS-206ENST00000530961 NUP62P37198 522 aaPredicted RBP11.52□□□□□ -0.57
CCS-206ENST00000530961 NHLH2Q02577 135 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 OR2F1Q13607 317 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
CCS-206ENST00000530961 TMEM61Q8N0U2 210 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 U3KQE9 123 aa11.52□□□□□ -0.57
CCS-206ENST00000530961 IGHV3-49A0A0A0MS15 119 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 TSPAN4O14817 238 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 RPL12P30050 165 aaKnown RBP11.51□□□□□ -0.57
CCS-206ENST00000530961 S100A7P31151 101 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 EIF2B2P49770 351 aaKnown RBP11.51□□□□□ -0.57
CCS-206ENST00000530961 LYZP61626 148 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 OR5C1Q8NGR4 320 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 ST8SIA2Q92186 375 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 PRR25Q96S07 402 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 RNF2Q99496 336 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
CCS-206ENST00000530961 PBDC1Q9BVG4 233 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 SLC45A2Q9UMX9 530 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 WDR83OSQ9Y284 106 aa11.51□□□□□ -0.57
CCS-206ENST00000530961 IGHV3OR16-13A0A075B7E8 117 aa11.5□□□□□ -0.57
CCS-206ENST00000530961 IGHV3-74A0A0B4J1X5 117 aa11.5□□□□□ -0.57
CCS-206ENST00000530961 AGPAT2O15120 278 aa11.5□□□□□ -0.57
CCS-206ENST00000530961 APOHP02749 345 aaPredicted RBP11.5□□□□□ -0.57
CCS-206ENST00000530961 FAM90A2PQ658T7 463 aa11.5□□□□□ -0.57
CCS-206ENST00000530961 ZNF546Q86UE3 836 aa11.5□□□□□ -0.57
CCS-206ENST00000530961 GTSCR1Q86UQ5 136 aa11.5□□□□□ -0.57
CCS-206ENST00000530961 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 K7EIL1 84 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 BUB3O43684 328 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 MPDU1O75352 247 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 AP2S1P53680 142 aaPredicted RBP11.49□□□□□ -0.57
CCS-206ENST00000530961 PLP1P60201 277 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 PAFAH1B2P68402 229 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 PXDC1Q5TGL8 231 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 Q6ZNX1 250 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 TMEM182Q6ZP80 229 aaPredicted RBP11.49□□□□□ -0.57
CCS-206ENST00000530961 TCF24Q7RTU0 167 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 CHAC2Q8WUX2 184 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 HSPB11Q9Y547 144 aa11.49□□□□□ -0.57
CCS-206ENST00000530961 HELTA6NFD8 242 aa11.48□□□□□ -0.57
CCS-206ENST00000530961 DFFBO76075 338 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms