RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 SLC25A31Q9H0C2 315 aa10.63□□□□□ -0.71
CTSB-217ENST00000530296 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
CTSB-217ENST00000530296 NPVFQ9HCQ7 196 aa10.63□□□□□ -0.71
CTSB-217ENST00000530296 MLXQ9UH92 298 aa10.63□□□□□ -0.71
CTSB-217ENST00000530296 IGHV3OR16-8A0A075B7F1 116 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 SMCO3A2RU48 225 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 PMS2P5A8MQ11 134 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 ZNF207O43670 478 aaKnown RBP10.62□□□□□ -0.71
CTSB-217ENST00000530296 IL4P05112 153 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 S100A11P31949 105 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 EIF2B2P49770 351 aaKnown RBP10.62□□□□□ -0.71
CTSB-217ENST00000530296 SULT1A1P50225 295 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 HAPLN4Q86UW8 402 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 PPP1R1CQ8WVI7 109 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 RHPN1-AS1Q9BWJ2 59 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
CTSB-217ENST00000530296 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 CHEK1O14757 476 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 PSG1P11464 419 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 CRYBB3P26998 211 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 P2RY1P47900 373 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 SELENOTP62341 195 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 RAB31Q13636 194 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 LRRC37A5PQ49AS3 106 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 CASC10Q5T4H9 136 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 TEPPQ6URK8 271 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 TMEM61Q8N0U2 210 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 BPIFCQ8NFQ6 507 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 PRR25Q96S07 402 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 SPAG8Q99932 426 aaPredicted RBP10.61□□□□□ -0.71
CTSB-217ENST00000530296 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
CTSB-217ENST00000530296 IGKV1D-37A0A075B6S9 117 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 FAM24AA6NFZ4 105 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 TSPAN4O14817 238 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 HNRNPCP07910 306 aaKnown RBP eCLIP10.6□□□□□ -0.711e-6■■□□□ 13.5
CTSB-217ENST00000530296 RRAS2P62070 204 aaPredicted RBP10.6□□□□□ -0.71
CTSB-217ENST00000530296 PAFAH1B2P68402 229 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 BAXQ07812 192 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 FGL1Q08830 312 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 SLC38A11Q08AI6 406 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 LILRB2Q8N423 598 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 TMEM252Q8N6L7 170 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 ZNF414Q96IQ9 312 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 VSIRQ9H7M9 311 aa10.6□□□□□ -0.71
CTSB-217ENST00000530296 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 CST7O76096 145 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 MPC2O95563 127 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 EDN2P20800 178 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 AP2S1P53680 142 aaPredicted RBP10.59□□□□□ -0.71
CTSB-217ENST00000530296 ZNF90Q03938 601 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 THAP6Q8TBB0 222 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 WDR89Q96FK6 387 aaPredicted RBP10.59□□□□□ -0.71
CTSB-217ENST00000530296 SLC45A2Q9UMX9 530 aa10.59□□□□□ -0.71
CTSB-217ENST00000530296 IGKV1OR2-108A0A075B7D4 117 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 IZUMO1RA6ND01 250 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 HELTA6NFD8 242 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 ZNF785A8K8V0 405 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 CCNKO75909 580 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 CMC4P56277 68 aaPredicted RBP10.58□□□□□ -0.72
CTSB-217ENST00000530296 ZNF546Q86UE3 836 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 TMEM217Q8N7C4 229 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 RNF2Q99496 336 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 PBDC1Q9BVG4 233 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 TMEM147Q9BVK8 224 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 UQCC1Q9NVA1 299 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 RNF24Q9Y225 148 aa10.58□□□□□ -0.72
CTSB-217ENST00000530296 IGHV3-49A0A0A0MS15 119 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
CTSB-217ENST00000530296 LYL1P12980 280 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 CXCL3P19876 107 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 RAP2BP61225 183 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 LYZP61626 148 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 RPL11P62913 178 aaKnown RBP10.57□□□□□ -0.72
CTSB-217ENST00000530296 OR2F1Q13607 317 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 FCN2Q15485 313 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 USF2Q15853 346 aaPredicted RBP10.57□□□□□ -0.72
CTSB-217ENST00000530296 C1orf194Q5T5A4 169 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 PXDC1Q5TGL8 231 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 CYP2G1PQ6ZSU1 146 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 FBXL17Q9UF56 701 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 U3KQE9 123 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 SORL1Q92673 2214 aa10.57□□□□□ -0.72
CTSB-217ENST00000530296 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 TRAV2A0A0B4J234 112 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 IGSF23A1L1A6 192 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 MPDU1O75352 247 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 CD81P60033 236 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 EWSR1Q01844 656 aaKnown RBP eCLIP10.56□□□□□ -0.72
CTSB-217ENST00000530296 ARL16Q0P5N6 197 aa10.56□□□□□ -0.72
CTSB-217ENST00000530296 VWC2Q2TAL6 325 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms