RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 EDN2P20800 178 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 EIF5AP63241 154 aaKnown RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 MEF2DQ14814 521 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 RBMY1FQ15415 496 aaKnown RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 IZUMO4Q1ZYL8 232 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 SP6Q3SY56 376 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 LBHQ53QV2 105 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 GPHB5Q86YW7 130 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 Q8N1Y9 231 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 OR5B3Q8NH48 314 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 ZNF502Q8TBZ5 544 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 LSM10Q969L4 123 aaKnown RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 C5orf66Q9H5L9 145 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 GSN-AS1Q9NRJ2 163 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 PPP1R14DQ9NXH3 145 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 FKBP11Q9NYL4 201 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 TNFSF18Q9UNG2 199 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 GPR132Q9UNW8 380 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 F11RQ9Y624 299 aaKnown RBP6.38□□□□□ -1.39
SSBP3-212ENST00000528930 DNAH6Q9C0G6 4158 aa6.38□□□□□ -1.39
SSBP3-212ENST00000528930 DNAH2Q9P225 4427 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 TRBV7-1A0A0A6YYK4 115 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 LGALS9O00182 355 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 UCP1P25874 307 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 ARL3P36405 182 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 RPL35P42766 123 aaKnown RBP6.37□□□□□ -1.39
SSBP3-212ENST00000528930 AKR1D1P51857 326 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 H2BFSP57053 126 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 HSPE1P61604 102 aaKnown RBP6.37□□□□□ -1.39
SSBP3-212ENST00000528930 SURF2Q15527 256 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-212ENST00000528930 SLC25A24Q6NUK1 477 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 ZNF546Q86UE3 836 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 OR2C3Q8N628 320 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 OR51S1Q8NGJ8 323 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 OR4A16Q8NH70 328 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 THAP6Q8TBB0 222 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 VN1R17PQ8TDU5 208 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM56Q96MV1 263 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 HINT2Q9BX68 163 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 SMCO4Q9NRQ5 59 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 SLC2A8Q9NY64 477 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 THYN1Q9P016 225 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 PEMTQ9UBM1 199 aa6.37□□□□□ -1.39
SSBP3-212ENST00000528930 A0A0G2JRQ6 117 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 TEX13DA0A0J9YY54 714 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-212ENST00000528930 IZUMO1RA6ND01 250 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 C2orf70A6NJV1 201 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 COLCA2A8K830 154 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 C1orf196B1AJZ1 125 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 K7EIM0 57 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 EIF3GO75821 320 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSBP3-212ENST00000528930 CDS2O95674 445 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 MT-ND4LP03901 98 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 CYCSP99999 105 aaKnown RBP6.36□□□□□ -1.39
SSBP3-212ENST00000528930 PRCDQ00LT1 54 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 EIF5AL1Q6IS14 154 aaKnown RBP6.36□□□□□ -1.39
SSBP3-212ENST00000528930 Q6ZRM9 215 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 CCDC71LQ8N9Z2 235 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 ZNF114Q8NC26 417 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 ZNF414Q96IQ9 312 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 PRRT1Q99946 306 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM222Q9H0R3 208 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 NAA60Q9H7X0 242 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 FLVCR2Q9UPI3 526 aa6.36□□□□□ -1.39
SSBP3-212ENST00000528930 FXYD6-FXYD2A0A087WZ82 144 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 TRAV14DV4A0A0A6YYC5 116 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 A0A0B4J2A0 478 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM213A2RRL7 107 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 CRYM-AS1A6NIL9 109 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 ZNF785A8K8V0 405 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 A8MWP6 167 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 INS-IGF2F8WCM5 200 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 NUPL2O15504 423 aaKnown RBP6.35□□□□□ -1.39
SSBP3-212ENST00000528930 CYB5BO43169 146 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 OR5AC1P0C628 307 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 GPR183P32249 361 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 AKR1C2P52895 323 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 RAB4BP61018 213 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 UBE2MP61081 183 aaKnown RBP6.35□□□□□ -1.39
SSBP3-212ENST00000528930 PEA15Q15121 130 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 DEFB114Q30KQ6 69 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 CD300EQ496F6 205 aaPredicted RBP6.35□□□□□ -1.39
SSBP3-212ENST00000528930 UNQ9165/PRO28630Q6UXU0 137 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 OR1L6Q8NGR2 347 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 OR2K2Q8NGT1 345 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 OR1P1Q8NH06 330 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 PCNPQ8WW12 178 aaKnown RBP6.35□□□□□ -1.39
SSBP3-212ENST00000528930 TMEM230Q96A57 120 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 SMDT1Q9H4I9 107 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 SHPKQ9UHJ6 478 aa6.35□□□□□ -1.39
SSBP3-212ENST00000528930 C14orf166Q9Y224 244 aaKnown RBP6.35□□□□□ -1.39
SSBP3-212ENST00000528930 IGHV3-35A0A0C4DH35 117 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 A8MZ25 164 aa6.34□□□□□ -1.39
SSBP3-212ENST00000528930 I3L2K1 104 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms