RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 NDUFB6O95139 128 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 UBL3O95164 117 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 SLC25A14O95258 325 aaPredicted RBP2.24□□□□□ -2.05
CD44-229ENST00000528672 APOMO95445 188 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 CYB5AP00167 134 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 CECR9P0C854 216 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 TRGC1P0CF51 173 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ZNF705DP0CH99 300 aaPredicted RBP2.24□□□□□ -2.05
CD44-229ENST00000528672 ZNF705BP0CI00 300 aaPredicted RBP2.24□□□□□ -2.05
CD44-229ENST00000528672 SLC25A6P12236 298 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 RPL22P35268 128 aaKnown RBP2.24□□□□□ -2.05
CD44-229ENST00000528672 HINT1P49773 126 aaPredicted RBP2.24□□□□□ -2.05
CD44-229ENST00000528672 TMEM258P61165 79 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ZNF90Q03938 601 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ATP5G2Q06055 141 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 FOXF1Q12946 379 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 CST6Q15828 149 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ZNF79Q15937 498 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 AADACL3Q5VUY0 350 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 CLEC19AQ6UXS0 136 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ATP5L2Q7Z4Y8 100 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 TRAPPC6BQ86SZ2 158 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 WDR86Q86TI4 376 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 MSRB3Q8IXL7 192 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 LINC00311Q8N616 119 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ZIC4Q8N9L1 334 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 LINC01555Q8NAE3 123 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 OR4X2Q8NGF9 303 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ATP6V0E2Q8NHE4 81 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 OTOSQ8NHW6 89 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 RPS4Y2Q8TD47 263 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 FXYD5Q96DB9 178 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 AGPAT4-IT1Q9H0P7 198 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 TMEM106BQ9NUM4 274 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 OR5V1Q9UGF6 321 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 CACFD1Q9UGQ2 172 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 ANAPC10Q9UM13 185 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 COQ4Q9Y3A0 265 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 HES2Q9Y543 173 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 CHCHD2Q9Y6H1 151 aaPredicted RBP2.24□□□□□ -2.05
CD44-229ENST00000528672 PLA2R1Q13018 1463 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 PTPRFP10586 1907 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 SBF1O95248 1867 aa2.24□□□□□ -2.05
CD44-229ENST00000528672 MAPKBP1O60336 1514 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 CROCC2H7BZ55 1655 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 IGHV3-66A0A0C4DH42 116 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 A0A0J9YW62 118 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 TRBV7-6A0A0J9YX20 115 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 PGPA6NDG6 321 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 OOSP1A8MZH6 123 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 F8W1H4 67 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 TMEM250H0YL14 139 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 M0R2P5 195 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 UQCRQO14949 82 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 PLA2G10O15496 165 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 DEDDO75618 318 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 HLA-DQB1P01920 261 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 MT-ND6P03923 174 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 CRYGAP11844 174 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 GADD45AP24522 165 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 CD70P32970 193 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 OPRM1P35372 400 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 POLR2IP36954 125 aaKnown RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 RPL23P62829 140 aaKnown RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 QRFPP83859 136 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 EBI3Q14213 229 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 RBMY1FQ15415 496 aaKnown RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 MSMO1Q15800 293 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 MRPL2Q5T653 305 aaKnown RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 C1orf140Q5VVS0 124 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 TMEM236Q5W0B7 351 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 C22orf39Q6P5X5 142 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 ZNF880Q6PDB4 577 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 MORN3Q6PF18 240 aaPredicted RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 CEMP1Q6PRD7 247 aaPredicted RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 Q6ZS92 163 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 CLEC20AQ6ZU45 233 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 AAED1Q7RTV5 226 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 SH2D6Q7Z4S9 175 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 FAM19A3Q7Z5A8 133 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 PCP2Q8IVA1 136 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 C10orf111Q8N326 155 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 C10orf126Q8N4M7 172 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 OR2T10Q8NGZ9 312 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 OR10AC1Q8NH08 325 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 C2orf15Q8WU43 125 aaKnown RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 POP5Q969H6 163 aaKnown RBP2.23□□□□□ -2.05
CD44-229ENST00000528672 MAL2Q969L2 176 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 THTPAQ9BU02 230 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 CHAC1Q9BUX1 264 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 IMUPQ9GZP8 106 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 KIF25-AS1Q9Y6Z4 181 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 ZSWIM8A7E2V4 1837 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 CHD8Q9HCK8 2581 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 ATRNO75882 1429 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 OTOFQ9HC10 1997 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 REREQ9P2R6 1566 aa2.23□□□□□ -2.05
CD44-229ENST00000528672 ARAP3Q8WWN8 1544 aa2.22□□□□□ -2.05
CD44-229ENST00000528672 KIF20BQ96Q89 1820 aa2.22□□□□□ -2.05
CD44-229ENST00000528672 RPRD2Q5VT52 1461 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms