RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NKX2-1P43699 371 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-217ENST00000527644 SPANXN5Q5MJ07 72 aa19.49■□□□□ 0.71
TSPAN4-217ENST00000527644 C16orf54Q6UWD8 224 aa19.49■□□□□ 0.71
TSPAN4-217ENST00000527644 Q6ZWC4 215 aa19.49■□□□□ 0.71
TSPAN4-217ENST00000527644 STPG3Q8N7X2 389 aa19.49■□□□□ 0.71
TSPAN4-217ENST00000527644 STRAPQ9Y3F4 350 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-217ENST00000527644 HELTA6NFD8 242 aa19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 RPL35AP18077 110 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 AP2S1P53680 142 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 POLR2GP62487 172 aaKnown RBP eCLIP19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 ZNF124Q15973 351 aa19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 STXBP6Q8NFX7 210 aa19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 RNF125Q96EQ8 232 aa19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 TP53TG1Q9Y2A0 90 aa19.48■□□□□ 0.71
TSPAN4-217ENST00000527644 PRSS46E5RG02 174 aa19.47■□□□□ 0.71
TSPAN4-217ENST00000527644 K7EQG2 157 aa19.47■□□□□ 0.71
TSPAN4-217ENST00000527644 ZNF90Q03938 601 aa19.47■□□□□ 0.71
TSPAN4-217ENST00000527644 GLMPQ8WWB7 406 aa19.47■□□□□ 0.71
TSPAN4-217ENST00000527644 TRGV9Q99603 122 aa19.47■□□□□ 0.71
TSPAN4-217ENST00000527644 TRAV6A0A075B6T7 132 aa19.46■□□□□ 0.71
TSPAN4-217ENST00000527644 DEFB131AP59861 70 aa19.46■□□□□ 0.71
TSPAN4-217ENST00000527644 IAH1Q2TAA2 248 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-217ENST00000527644 PFDN2Q9UHV9 154 aa19.46■□□□□ 0.71
TSPAN4-217ENST00000527644 H3BP45 60 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 BUB3O43684 328 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 NUP62P37198 522 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 OR8G2PQ6IF36 304 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 FAM24BQ8N5W8 94 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 THAP8Q8NA92 274 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 NUDT15Q9NV35 164 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 PSENENQ9NZ42 101 aa19.45■□□□□ 0.7
TSPAN4-217ENST00000527644 SNRPGP15A8MWD9 76 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 SPRY2O43597 315 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 MZT2BQ6NZ67 158 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 ZBTB8BQ8NAP8 495 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 DCANP1Q8TF63 244 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 SMIM8Q96KF7 97 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 PBDC1Q9BVG4 233 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 CSTL1Q9H114 145 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 PTTG2Q9NZH5 202 aa19.44■□□□□ 0.7
TSPAN4-217ENST00000527644 FAM240BA0A1B0GVZ2 78 aa19.43■□□□□ 0.7
TSPAN4-217ENST00000527644 SSSCA1O60232 199 aa19.43■□□□□ 0.7
TSPAN4-217ENST00000527644 DEFB135Q30KP9 77 aa19.43■□□□□ 0.7
TSPAN4-217ENST00000527644 IL17DQ8TAD2 202 aa19.43■□□□□ 0.7
TSPAN4-217ENST00000527644 WDR12Q9GZL7 423 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-217ENST00000527644 IGKV1OR2-108A0A075B7D4 117 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 H2AFB2P0C5Z0 115 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 LEMD1Q68G75 181 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 ZFAND6Q6FIF0 208 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 ZNF431Q8TF32 576 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 RNF183Q96D59 192 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 GSKIPQ9P0R6 139 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 TBC1D24Q9ULP9 559 aa19.42■□□□□ 0.7
TSPAN4-217ENST00000527644 SCGB1D2O95969 90 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 CFDP00746 253 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 LYZP61626 148 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 ASAH1Q13510 395 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 OR2F1Q13607 317 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 ZNF846Q147U1 533 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 SIGLEC15Q6ZMC9 328 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 RAB40CQ96S21 281 aa19.41■□□□□ 0.7
TSPAN4-217ENST00000527644 PAX9P55771 341 aa19.4■□□□□ 0.7
TSPAN4-217ENST00000527644 ACOT7LQ6ZUV0 252 aa19.4■□□□□ 0.7
TSPAN4-217ENST00000527644 SEC22CQ9BRL7 303 aa19.4■□□□□ 0.7
TSPAN4-217ENST00000527644 ZNF688P0C7X2 276 aa19.39■□□□□ 0.69
TSPAN4-217ENST00000527644 TAS2R30P59541 319 aa19.39■□□□□ 0.69
TSPAN4-217ENST00000527644 AKR1C1Q04828 323 aa19.39■□□□□ 0.69
TSPAN4-217ENST00000527644 NRN1Q9NPD7 142 aa19.39■□□□□ 0.69
TSPAN4-217ENST00000527644 PMS2P5A8MQ11 134 aa19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 C1orf194Q5T5A4 169 aa19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 TMEM14EPQ6UXP3 125 aa19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 CSMD3Q7Z407 3707 aa19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 TMEM144Q7Z5S9 345 aa19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 STHQ8IWL8 128 aa19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 C12orf45Q8N5I9 185 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 SEPSECSQ9HD40 501 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-217ENST00000527644 CCSO14618 274 aa19.37■□□□□ 0.69
TSPAN4-217ENST00000527644 TSC22D2O75157 780 aa19.37■□□□□ 0.69
TSPAN4-217ENST00000527644 UPK1BO75841 260 aa19.37■□□□□ 0.69
TSPAN4-217ENST00000527644 FBXL17Q9UF56 701 aa19.37■□□□□ 0.69
TSPAN4-217ENST00000527644 RCL1Q9Y2P8 373 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-217ENST00000527644 MBPP02686 304 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-217ENST00000527644 BPIFCQ8NFQ6 507 aa19.36■□□□□ 0.69
TSPAN4-217ENST00000527644 BATF3Q9NR55 127 aa19.36■□□□□ 0.69
TSPAN4-217ENST00000527644 FAM25EA8MYX2 175 aa19.35■□□□□ 0.69
TSPAN4-217ENST00000527644 SNRPD3P62318 126 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-217ENST00000527644 GATAD1Q8WUU5 269 aa19.35■□□□□ 0.69
TSPAN4-217ENST00000527644 PPP1R14BQ96C90 147 aa19.35■□□□□ 0.69
TSPAN4-217ENST00000527644 SLC45A2Q9UMX9 530 aa19.35■□□□□ 0.69
TSPAN4-217ENST00000527644 SMCO3A2RU48 225 aa19.34■□□□□ 0.69
TSPAN4-217ENST00000527644 C5orf51A6NDU8 294 aa19.34■□□□□ 0.69
TSPAN4-217ENST00000527644 METTL15P1P0C7V9 234 aa19.34■□□□□ 0.69
TSPAN4-217ENST00000527644 DLK1P80370 383 aa19.34■□□□□ 0.69
TSPAN4-217ENST00000527644 PSMG4Q5JS54 123 aa19.34■□□□□ 0.69
TSPAN4-217ENST00000527644 OR10P1Q8NGE3 313 aa19.34■□□□□ 0.69
TSPAN4-217ENST00000527644 STARD9Q9P2P6 4700 aa19.33■□□□□ 0.69
TSPAN4-217ENST00000527644 C7orf66A4D0T2 115 aa19.33■□□□□ 0.68
TSPAN4-217ENST00000527644 FNDC10F2Z333 226 aa19.33■□□□□ 0.68
TSPAN4-217ENST00000527644 CCNKO75909 580 aa19.33■□□□□ 0.68
TSPAN4-217ENST00000527644 CA1P00915 261 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms