RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GRAMD2BQ96HH9 432 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 MRPL27Q9P0M9 148 aaKnown RBP10.14□□□□□ -0.79
CAPN1-208ENST00000527323 RNF7Q9UBF6 113 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 ABCA12Q86UK0 2595 aa10.14□□□□□ -0.79
CAPN1-208ENST00000527323 PEX7O00628 323 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 PRB1P04280 392 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 UBE2G1P62253 170 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 ZNF474Q6S9Z5 364 aaPredicted RBP10.13□□□□□ -0.79
CAPN1-208ENST00000527323 IGFL3Q6UXB1 125 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 OR2D3Q8NGH3 330 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 OR1L8Q8NGR8 309 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 SAP30LQ9HAJ7 183 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 GRNP28799 593 aaKnown RBP10.13□□□□□ -0.79
CAPN1-208ENST00000527323 REG1BP48304 166 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 CDSNQ15517 529 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 BLNKQ8WV28 456 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 GNG5P63218 68 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 SSBP2P81877 361 aaPredicted RBP10.13□□□□□ -0.79
CAPN1-208ENST00000527323 EBLN2Q6P2I7 272 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 PNKDQ8N490 385 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 TNFRSF19Q9NS68 423 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 SLC25A15Q9Y619 301 aa10.13□□□□□ -0.79
CAPN1-208ENST00000527323 CORTO00230 105 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 LHBP01229 141 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 APOA2P02652 100 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
CAPN1-208ENST00000527323 TNFAIP6P98066 277 aaPredicted RBP10.12□□□□□ -0.79
CAPN1-208ENST00000527323 ZCCHC24Q8N2G6 241 aaKnown RBP10.12□□□□□ -0.79
CAPN1-208ENST00000527323 ARFGEF3Q5TH69 2177 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 A0A1W2PN81 502 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 LHFPL4Q7Z7J7 247 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 CACNG8Q8WXS5 425 aa10.12□□□□□ -0.79
CAPN1-208ENST00000527323 CCL25O15444 150 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 HIST1H1EP10412 219 aaKnown RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 ZNF738Q8NE65 137 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 OR1L4Q8NGR5 311 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 ORAOV1Q8WV07 137 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 OR8B2Q96RD0 313 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 ALKBH7Q9BT30 221 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 CHRDL1Q9BU40 450 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 MRPL20Q9BYC9 149 aaKnown RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 CLEC5AQ9NY25 188 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 A0A0G2JNJ9 132 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 FAM90A27PA6NNH2 459 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 IGLL1P15814 213 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 ORM2P19652 201 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 FOXA3P55318 350 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 RASL11AQ6T310 242 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 SLC25A48Q6ZT89 311 aaKnown RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 Q9UFV3 132 aa10.11□□□□□ -0.79
CAPN1-208ENST00000527323 RPUSD1Q9UJJ7 312 aaKnown RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
CAPN1-208ENST00000527323 TCF24Q7RTU0 167 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 WIPF2Q8TF74 440 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-208ENST00000527323 ST6GALNAC6Q969X2 333 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 WNK2Q9Y3S1 2297 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 PTPN13Q12923 2485 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 DSCAMO60469 2012 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 PGPA6NDG6 321 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 E7EUB6 86 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 PRRG2O14669 202 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 GLRXP35754 106 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 C10orf55Q5SWW7 151 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 LEMD1Q68G75 181 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 FAM231DQ6ZW35 169 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 PDPNQ86YL7 162 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 MBD6Q96DN6 1003 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 GAFA1Q96PS6 74 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 ZNF430Q9H8G1 570 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-208ENST00000527323 hADV38S2A0JD32 116 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 SH2D7A6NKC9 451 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-208ENST00000527323 UQCRFS1P47985 274 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 LINC00305Q7Z4B0 112 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 KIR3DL3Q8N743 410 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 FLYWCH2Q96CP2 140 aaKnown RBP10.1□□□□□ -0.79
CAPN1-208ENST00000527323 NCOR1P1Q9H4R4 102 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 NDUFA4L2Q9NRX3 87 aa10.1□□□□□ -0.79
CAPN1-208ENST00000527323 M0QZ24 198 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 CD24P25063 80 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 SUB1P53999 127 aaKnown RBP eCLIP10.09□□□□□ -0.796e-7■□□□□ 8.8
CAPN1-208ENST00000527323 PATE2Q6UY27 113 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 WFDC8Q8IUA0 241 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 OR8B3Q8NGG8 313 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-208ENST00000527323 ZNF714Q96N38 554 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-208ENST00000527323 IGHV2-26A0A0B4J1V2 119 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 C1orf185Q5T7R7 199 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 OR1B1Q8NGR6 318 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
CAPN1-208ENST00000527323 FNDC4Q9H6D8 234 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 443.5 ms