RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 CCNKO75909 580 aa13.39□□□□□ -0.27
TRIM3-205ENST00000527237 RD3LP0DJH9 198 aa13.39□□□□□ -0.27
TRIM3-205ENST00000527237 NKX2-1P43699 371 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-205ENST00000527237 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
TRIM3-205ENST00000527237 C16orf54Q6UWD8 224 aa13.39□□□□□ -0.27
TRIM3-205ENST00000527237 S100ZQ8WXG8 99 aa13.39□□□□□ -0.27
TRIM3-205ENST00000527237 OVOL2Q9BRP0 275 aa13.39□□□□□ -0.27
TRIM3-205ENST00000527237 C3orf84H3BNL1 204 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 K7EQG2 157 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 IFNA21P01568 189 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 DEFB131AP59861 70 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 OR2F1Q13607 317 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 IAH1Q2TAA2 248 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-205ENST00000527237 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 LEMD1Q68G75 181 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 ZFAND6Q6FIF0 208 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 ACOT7LQ6ZUV0 252 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
TRIM3-205ENST00000527237 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 PBDC1Q9BVG4 233 aa13.38□□□□□ -0.27
TRIM3-205ENST00000527237 RCL1Q9Y2P8 373 aaKnown RBP13.38□□□□□ -0.27
TRIM3-205ENST00000527237 CD5P06127 495 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 PAX9P55771 341 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 IFITM3Q01628 133 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 THAP8Q8NA92 274 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 DCANP1Q8TF63 244 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 NARS2Q96I59 477 aaKnown RBP13.37□□□□□ -0.27
TRIM3-205ENST00000527237 PSENENQ9NZ42 101 aa13.37□□□□□ -0.27
TRIM3-205ENST00000527237 STRAPQ9Y3F4 350 aaKnown RBP13.37□□□□□ -0.27
TRIM3-205ENST00000527237 TRAV2A0A0B4J234 112 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 PMS2P5A8MQ11 134 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 H2AFB2P0C5Z0 115 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 APOC4P55056 127 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 LYZP61626 148 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 ASAH1Q13510 395 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 GSG1LQ6UXU4 331 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 STPG3Q8N7X2 389 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 ZNF431Q8TF32 576 aaPredicted RBP13.36□□□□□ -0.27
TRIM3-205ENST00000527237 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 TRGV9Q99603 122 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 GSKIPQ9P0R6 139 aa13.36□□□□□ -0.27
TRIM3-205ENST00000527237 FAM240BA0A1B0GVZ2 78 aa13.35□□□□□ -0.27
TRIM3-205ENST00000527237 BUB3O43684 328 aa13.35□□□□□ -0.27
TRIM3-205ENST00000527237 UPK1BO75841 260 aa13.35□□□□□ -0.27
TRIM3-205ENST00000527237 LYL1P12980 280 aa13.35□□□□□ -0.27
TRIM3-205ENST00000527237 RPP30P78346 268 aaKnown RBP13.35□□□□□ -0.27
TRIM3-205ENST00000527237 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
TRIM3-205ENST00000527237 OR8G2PQ6IF36 304 aa13.35□□□□□ -0.27
TRIM3-205ENST00000527237 WDR12Q9GZL7 423 aaKnown RBP13.35□□□□□ -0.27
TRIM3-205ENST00000527237 MBPP02686 304 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-205ENST00000527237 GATA2P23769 480 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-205ENST00000527237 EIF2B2P49770 351 aaKnown RBP13.34□□□□□ -0.27
TRIM3-205ENST00000527237 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
TRIM3-205ENST00000527237 TMEM182Q6ZP80 229 aaPredicted RBP13.34□□□□□ -0.27
TRIM3-205ENST00000527237 LYSTQ99698 3801 aa13.33□□□□□ -0.27
TRIM3-205ENST00000527237 KIR2DL5BA0A0G2JN68 375 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 KIR2DL5BA0A0G2JPC4 375 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 FAM25EA8MYX2 175 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 METTL15P1P0C7V9 234 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 RRAS2P62070 204 aaPredicted RBP13.33□□□□□ -0.28
TRIM3-205ENST00000527237 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 KIR2DL5AQ8N109 375 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 KIR2DL5BQ8NHK3 375 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 SMIM8Q96KF7 97 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 RYR3Q15413 4870 aa13.33□□□□□ -0.28
TRIM3-205ENST00000527237 SMCO3A2RU48 225 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 HELTA6NFD8 242 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 KNCNA6PVL3 124 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 SPRY2O43597 315 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
TRIM3-205ENST00000527237 MZT2BQ6NZ67 158 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 TMEM14EPQ6UXP3 125 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 Q6ZWC4 215 aa13.32□□□□□ -0.28
TRIM3-205ENST00000527237 C12orf45Q8N5I9 185 aaPredicted RBP13.32□□□□□ -0.28
TRIM3-205ENST00000527237 DYNC2H1Q8NCM8 4307 aaKnown RBP13.31□□□□□ -0.28
TRIM3-205ENST00000527237 UBE2CO00762 179 aa13.31□□□□□ -0.28
TRIM3-205ENST00000527237 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM3-205ENST00000527237 ARL16Q0P5N6 197 aa13.31□□□□□ -0.28
TRIM3-205ENST00000527237 ENKURQ8TC29 256 aa13.31□□□□□ -0.28
TRIM3-205ENST00000527237 RNF183Q96D59 192 aa13.31□□□□□ -0.28
TRIM3-205ENST00000527237 TP53TG1Q9Y2A0 90 aa13.31□□□□□ -0.28
TRIM3-205ENST00000527237 LSM5Q9Y4Y9 91 aaKnown RBP13.31□□□□□ -0.28
TRIM3-205ENST00000527237 C7orf66A4D0T2 115 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 C5orf51A6NDU8 294 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 K7EPK0 472 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 FABP1P07148 127 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 PSMG4Q5JS54 123 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 RAB40CQ96S21 281 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 C11orf1Q9H5F2 150 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 NRN1Q9NPD7 142 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 TENM2Q9NT68 2774 aa13.3□□□□□ -0.28
TRIM3-205ENST00000527237 A0A0J9YWU9 116 aa13.29□□□□□ -0.28
TRIM3-205ENST00000527237 SNRPGP15A8MWD9 76 aa13.29□□□□□ -0.28
TRIM3-205ENST00000527237 TSC22D2O75157 780 aa13.29□□□□□ -0.28
TRIM3-205ENST00000527237 CA1P00915 261 aaPredicted RBP13.29□□□□□ -0.28
TRIM3-205ENST00000527237 TMEM144Q7Z5S9 345 aa13.29□□□□□ -0.28
TRIM3-205ENST00000527237 TRPT1Q86TN4 253 aaKnown RBP13.29□□□□□ -0.28
TRIM3-205ENST00000527237 CSTL1Q9H114 145 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms