RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 B4DSR2 109 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 IGHV1-69P01742 117 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 GZMBP10144 247 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 SELENOTP62341 195 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 CX3CL1P78423 397 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 PLXNB1O43157 2135 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 NDUFB4O95168 129 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 COL8A1P27658 744 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 TMEM116Q8NCL8 245 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 ARPC1AQ92747 370 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 SFRP2Q96HF1 295 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 C14orf144Q96I85 54 aa12.86□□□□□ -0.35
SNRNP35-204ENST00000527158 ATP5G3P48201 142 aa12.85□□□□□ -0.35
SNRNP35-204ENST00000527158 UHRF2Q96PU4 802 aa12.85□□□□□ -0.35
SNRNP35-204ENST00000527158 FAM103A1Q9BTL3 118 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-204ENST00000527158 C7orf69Q9H7B7 122 aa12.85□□□□□ -0.35
SNRNP35-204ENST00000527158 MRPL36Q9P0J6 103 aaKnown RBP12.85□□□□□ -0.35
SNRNP35-204ENST00000527158 RPL15P61313 204 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 RASL11BQ9BPW5 248 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 TRAPPC1Q9Y5R8 145 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 FAM208BQ5VWN6 2430 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 IGHV3OR16-10A0A075B7F0 116 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 TRAV40A0A0B4J280 105 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 A0A0U1RQK1 487 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 ZNF320A2RRD8 509 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 C9JCJ5 164 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 UBE2G2P60604 165 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 SSTP61278 116 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 IQCJQ1A5X6 159 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 SPATA31B1PQ5VZV4 182 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 RUSC1-AS1Q66K80 236 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 Q8N9W7 124 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 C11orf52Q96A22 123 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 RNF2Q99496 336 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 TNFRSF19Q9NS68 423 aa12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
SNRNP35-204ENST00000527158 TAS2R45P59539 299 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 ZNF90Q03938 601 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 OR10G8Q8NGN5 311 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 OR1L4Q8NGR5 311 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 TRGV9Q99603 122 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 DNAJC4Q9NNZ3 241 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 HIF1ANQ9NWT6 349 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 NAV3Q8IVL0 2385 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 SPG11Q96JI7 2443 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 IGHV3-21A0A0B4J1V1 117 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 OR5G3P0C626 314 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 GATA3P23771 443 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 GCHFRP30047 84 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 YPEL3P61236 119 aaPredicted RBP12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 GBGT1Q8N5D6 347 aa12.83□□□□□ -0.36
SNRNP35-204ENST00000527158 UTP20O75691 2785 aaKnown RBP12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 I3L2K1 104 aa12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 COX7A2P2O60397 106 aa12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 BPIFB3P59826 476 aa12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 MRPL32Q9BYC8 188 aaKnown RBP12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 ASH1LQ9NR48 2969 aaKnown RBP12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 LRRK2Q5S007 2527 aa12.82□□□□□ -0.36
SNRNP35-204ENST00000527158 HLA-DRB1P01911 266 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 OR5T1Q8NG75 326 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 SGMS2Q8NHU3 365 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 TMEM167BQ9NRX6 74 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 IGHV7-81A0A0B4J1V7 117 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 C10orf113Q5VZT2 155 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 ZNF600Q6ZNG1 722 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 PQLC2Q6ZP29 291 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 TTC9CQ8N5M4 171 aa12.81□□□□□ -0.36
SNRNP35-204ENST00000527158 C8orf88P0DMB2 117 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 NDPQ00604 133 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 TEX38Q6PEX7 206 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 LINC01356Q8N9X3 169 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 MEGF9Q9H1U4 602 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 IL36BQ9NZH7 164 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 TRBV9A0A0B4J1U6 114 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 PSMB11A5LHX3 300 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 A8MWP6 167 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 IGHV4-38-2P0DP08 117 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 DEFB113Q30KQ7 82 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 ASPHD1Q5U4P2 390 aa12.8□□□□□ -0.36
SNRNP35-204ENST00000527158 J3QKU1 62 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 OR7C2O60412 319 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 COX19Q49B96 90 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 NDUFAF3Q9BU61 184 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 DERL1Q9BUN8 251 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 PRO1933Q9H354 126 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 THYN1Q9P016 225 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 SCO2A0A1W2PP80 73 aa12.79□□□□□ -0.36
SNRNP35-204ENST00000527158 K7EIM0 57 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms