RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 P2RY1P47900 373 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 NPBWR1P48145 328 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 RAB11AP62491 216 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 RPEL1Q2QD12 228 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 VWC2Q2TAL6 325 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 ACOT7LQ6ZUV0 252 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 OR9G4Q8NGQ1 327 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 RETNQ9HD89 108 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 MBD2Q9UBB5 411 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 RPS10-NUDT3A0A1W2PQS6 291 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 TMEM213A2RRL7 107 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 NDUFA4O00483 81 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 GNG7O60262 68 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 SULT1A1P50225 295 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-204ENST00000526430 RPP30P78346 268 aaKnown RBP8.17□□□□□ -1.1
NEDD8-204ENST00000526430 DLK1P80370 383 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 ZNF90Q03938 601 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 ETFRF1Q6IPR1 90 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 TOMM20LQ6UXN7 152 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 STPG3Q8N7X2 389 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 TMEM190Q8WZ59 177 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 ACY3Q96HD9 319 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 ST6GAL2Q96JF0 529 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
NEDD8-204ENST00000526430 PAIP2BQ9ULR5 123 aaKnown RBP8.17□□□□□ -1.1
NEDD8-204ENST00000526430 TRAV30A0A087WSZ9 112 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 A8MWP6 167 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 SMLR1H3BR10 107 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 L7N2F9 121 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 SCAF4O95104 1147 aaKnown RBP8.16□□□□□ -1.1
NEDD8-204ENST00000526430 IGLV1-51P01701 117 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 OR10J1P30954 320 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 CAV2P51636 162 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 VAMP2P63027 116 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 OR11H4Q8NGC9 324 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 OR1S2Q8NGQ3 325 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 TRGV9Q99603 122 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 SIGLEC8Q9NYZ4 499 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 U3KQE9 123 aa8.16□□□□□ -1.1
NEDD8-204ENST00000526430 K7EMT4 169 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 NUPL2O15504 423 aaKnown RBP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 APOHP02749 345 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 RLN2P04090 185 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 PSG1P11464 419 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 PVALBP20472 110 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 CBLN1P23435 193 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 GATA2P23769 480 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 BCAP31P51572 246 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 RAP2BP61225 183 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 EWSR1Q01844 656 aaKnown RBP eCLIP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 FAM106AQ4KMX7 169 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 LGALS9CQ6DKI2 356 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 ZNF600Q6ZNG1 722 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 TMEM217Q8N7C4 229 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 ASB13Q8WXK3 278 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 GGACTQ9BVM4 153 aa8.15□□□□□ -1.1
NEDD8-204ENST00000526430 PUS1Q9Y606 427 aaKnown RBP eCLIP8.15□□□□□ -1.1
NEDD8-204ENST00000526430 ZNF320A2RRD8 509 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 RNF222A6NCQ9 220 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 ZNF207O43670 478 aaKnown RBP8.14□□□□□ -1.11
NEDD8-204ENST00000526430 TOMM40O96008 361 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 LINC00869P0C866 280 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 FOLR2P14207 255 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 S100A11P31949 105 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-204ENST00000526430 CD300CQ08708 224 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 SLC38A11Q08AI6 406 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-204ENST00000526430 DEFB114Q30KQ6 69 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 OR2T35Q8NGX2 323 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 TUBA4BQ9H853 241 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 NPVFQ9HCQ7 196 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 MLXQ9UH92 298 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 HSPB11Q9Y547 144 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 FAT2Q9NYQ8 4349 aa8.14□□□□□ -1.11
NEDD8-204ENST00000526430 HERC1Q15751 4861 aa8.13□□□□□ -1.11
NEDD8-204ENST00000526430 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
NEDD8-204ENST00000526430 CXorf65A6NEN9 183 aa8.13□□□□□ -1.11
NEDD8-204ENST00000526430 RD3LP0DJH9 198 aa8.13□□□□□ -1.11
NEDD8-204ENST00000526430 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
NEDD8-204ENST00000526430 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-204ENST00000526430 PATE2Q6UY27 113 aa8.13□□□□□ -1.11
NEDD8-204ENST00000526430 OR5C1Q8NGR4 320 aa8.13□□□□□ -1.11
NEDD8-204ENST00000526430 MGST2Q99735 147 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms