RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 BMPR1BO00238 502 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 CD28P10747 220 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 SELENOTP62341 195 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 AKR1C8PQ5T2L2 129 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 OR4F5Q8NH21 305 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 ATP6V0BQ99437 205 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 DOK5Q9P104 306 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 RNF114Q9Y508 228 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 JMJD1CQ15652 2540 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 LOC100996750A0A140TA64 210 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 WI2-2373I1.2A0A1W2PRP0 233 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 M6PRP20645 277 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 ARL3P36405 182 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 PLP1P60201 277 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 ZNF616Q08AN1 781 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 ACOT6Q3I5F7 207 aaPredicted RBP11.09□□□□□ -0.63
COLCA2-202ENST00000526216 CLLU1Q5K131 121 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 FAM122CQ6P4D5 195 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 Q6ZRG5 221 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 OR10G4Q8NGN3 311 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 OR10G9Q8NGN4 311 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 OR10G7Q8NGN6 311 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 RCC1LQ96I51 464 aaKnown RBP11.09□□□□□ -0.63
COLCA2-202ENST00000526216 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 KRTAP4-6Q9BYQ5 205 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
COLCA2-202ENST00000526216 ZNF705EA8MWA4 302 aaPredicted RBP11.08□□□□□ -0.64
COLCA2-202ENST00000526216 SEC14L6B5MCN3 397 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 I3L521 148 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 LGALS1P09382 135 aaKnown RBP11.08□□□□□ -0.64
COLCA2-202ENST00000526216 RD3LP0DJH9 198 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 RAB5CP51148 216 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 USF2Q15853 346 aaPredicted RBP11.08□□□□□ -0.64
COLCA2-202ENST00000526216 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 PRIMA1Q86XR5 153 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 OR51G1Q8NGK1 321 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 SLC25A22Q9H936 323 aa11.08□□□□□ -0.64
COLCA2-202ENST00000526216 PUS1Q9Y606 427 aaKnown RBP eCLIP11.08□□□□□ -0.64
COLCA2-202ENST00000526216 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 OR2C1O95371 312 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 MBP02144 154 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 OR5G3P0C626 314 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 CDX1P47902 265 aaPredicted RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 LYZP61626 148 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 SPSB3Q6PJ21 355 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
COLCA2-202ENST00000526216 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
COLCA2-202ENST00000526216 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 IGHV3OR16-8A0A075B7F1 116 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 A0A087WW49 117 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 HMGB3O15347 200 aaKnown RBP11.06□□□□□ -0.64
COLCA2-202ENST00000526216 IL4P05112 153 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 ORM2P19652 201 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 DPPA3Q6W0C5 159 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 OR1B1Q8NGR6 318 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 Q8WTZ3 238 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 MBD3L1Q8WWY6 194 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 RAB24Q969Q5 203 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 RNF125Q96EQ8 232 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
COLCA2-202ENST00000526216 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 CTXND1A0A1B0GTU2 59 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 ADARB2-AS1A8MUL3 147 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 TEX46H3BTG2 121 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 COX7A2P2O60397 106 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 FABP1P07148 127 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 CDC34P49427 236 aaPredicted RBP11.05□□□□□ -0.64
COLCA2-202ENST00000526216 CCL20P78556 96 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 OR1L4Q8NGR5 311 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 LYPD6BQ8NI32 183 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 LRRC20Q8TCA0 184 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
COLCA2-202ENST00000526216 PBDC1Q9BVG4 233 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 ACTR3CQ9C0K3 210 aaPredicted RBP11.05□□□□□ -0.64
COLCA2-202ENST00000526216 DNAJC4Q9NNZ3 241 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 FUT9Q9Y231 359 aa11.05□□□□□ -0.64
COLCA2-202ENST00000526216 A0A1B0GV50 99 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 GGCTO75223 188 aaKnown RBP11.04□□□□□ -0.64
COLCA2-202ENST00000526216 HYPMO75409 117 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 FGF8P55075 233 aaPredicted RBP11.04□□□□□ -0.64
COLCA2-202ENST00000526216 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 KRTAP24-1Q3LI83 254 aa11.04□□□□□ -0.64
COLCA2-202ENST00000526216 FAM209BQ5JX69 171 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms