RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 PSG1P11464 419 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 SNRPD3P62318 126 aaKnown RBP8.51□□□□□ -1.05
HIF3A-209ENST00000525854 RAB11AP62491 216 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 ZNF79Q15937 498 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 SPANXN2Q5MJ10 180 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 TRPT1Q86TN4 253 aaKnown RBP8.51□□□□□ -1.05
HIF3A-209ENST00000525854 CCDC190Q86UF4 302 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 OR51G1Q8NGK1 321 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 C11orf45Q8TAV5 145 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 CIB3Q96Q77 187 aaPredicted RBP8.51□□□□□ -1.05
HIF3A-209ENST00000525854 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
HIF3A-209ENST00000525854 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 TMED3Q9Y3Q3 217 aa8.51□□□□□ -1.05
HIF3A-209ENST00000525854 BUB3O43684 328 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 PITX3O75364 302 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 LY6G6CO95867 125 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
HIF3A-209ENST00000525854 PSMG4Q5JS54 123 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 ACTL10Q5JWF8 245 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 OR8G2PQ6IF36 304 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 SIGLEC15Q6ZMC9 328 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 CENPSQ8N2Z9 138 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 PHLDA1Q8WV24 401 aaPredicted RBP8.5□□□□□ -1.05
HIF3A-209ENST00000525854 RNF125Q96EQ8 232 aa8.5□□□□□ -1.05
HIF3A-209ENST00000525854 KNCNA6PVL3 124 aa8.49□□□□□ -1.05
HIF3A-209ENST00000525854 SFT2D2O95562 160 aa8.49□□□□□ -1.05
HIF3A-209ENST00000525854 INPP1P49441 399 aa8.49□□□□□ -1.05
HIF3A-209ENST00000525854 UBE2MP61081 183 aaKnown RBP8.49□□□□□ -1.05
HIF3A-209ENST00000525854 NUTF2P61970 127 aaKnown RBP8.49□□□□□ -1.05
HIF3A-209ENST00000525854 GAMTQ14353 236 aa8.49□□□□□ -1.05
HIF3A-209ENST00000525854 RAB40CQ96S21 281 aa8.49□□□□□ -1.05
HIF3A-209ENST00000525854 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
HIF3A-209ENST00000525854 SNRPGP15A8MWD9 76 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 GIG44P09565 113 aaPredicted RBP8.48□□□□□ -1.05
HIF3A-209ENST00000525854 IAPPP10997 89 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 PPP1R1AQ13522 171 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 C1orf194Q5T5A4 169 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 LINC00299Q6ZSB3 139 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 RBM38Q9H0Z9 239 aaKnown RBP8.48□□□□□ -1.05
HIF3A-209ENST00000525854 PTTG2Q9NZH5 202 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 FBXL17Q9UF56 701 aa8.48□□□□□ -1.05
HIF3A-209ENST00000525854 PAIP2BQ9ULR5 123 aaKnown RBP8.48□□□□□ -1.05
HIF3A-209ENST00000525854 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 NAP1L6A6NFF2 107 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 DEFB4AO15263 64 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 SYNGR2O43760 224 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 CFDP00746 253 aaPredicted RBP8.47□□□□□ -1.05
HIF3A-209ENST00000525854 MIFP14174 115 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 ID1P41134 155 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 NANOS2P60321 138 aaKnown RBP8.47□□□□□ -1.05
HIF3A-209ENST00000525854 ZNF90Q03938 601 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 TRIQKQ629K1 86 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 Q8NAQ8 132 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 TRGV9Q99603 122 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 C1QTNF4Q9BXJ3 329 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 SRRQ9GZT4 340 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
HIF3A-209ENST00000525854 IGKV1D-37A0A075B6S9 117 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 ZNF705EA8MWA4 302 aaPredicted RBP8.46□□□□□ -1.06
HIF3A-209ENST00000525854 HOXB5P09067 269 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 C4BPBP20851 252 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 NKX2-1P43699 371 aaPredicted RBP8.46□□□□□ -1.06
HIF3A-209ENST00000525854 LYZP61626 148 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 PLECQ15149 4684 aaKnown RBP8.46□□□□□ -1.06
HIF3A-209ENST00000525854 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 GGNBP1Q5YKI7 109 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 THAP8Q8NA92 274 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 PPP1R14BQ96C90 147 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 MAGT1Q9H0U3 335 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 TBC1D24Q9ULP9 559 aa8.46□□□□□ -1.06
HIF3A-209ENST00000525854 HYDINQ4G0P3 5121 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 IGHV4-28A0A0C4DH34 117 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 CENPXA8MT69 81 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 C11orf94C9JXX5 98 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 H3BMM0 161 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 WRBO00258 174 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 NDUFB6O95139 128 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 IFNA21P01568 189 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 S100A7P31151 101 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 TCTAP57738 103 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 OR2F1Q13607 317 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 OR8I2Q8N0Y5 310 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 COQ8AQ8NI60 647 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 C2CD4CQ8TF44 421 aa8.45□□□□□ -1.06
HIF3A-209ENST00000525854 STRAPQ9Y3F4 350 aaKnown RBP8.45□□□□□ -1.06
HIF3A-209ENST00000525854 C9orf170A2RU37 121 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 HLA-DRB4P13762 266 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 PSMB3P49720 205 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 BAK1Q16611 211 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 LGALS9CQ6DKI2 356 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 S100ZQ8WXG8 99 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 LINC00052Q96N35 136 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 C7orf50Q9BRJ6 194 aaKnown RBP8.44□□□□□ -1.06
HIF3A-209ENST00000525854 CLEC5AQ9NY25 188 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 SLC45A2Q9UMX9 530 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 HLA-DRB4X5D2U9 266 aa8.44□□□□□ -1.06
HIF3A-209ENST00000525854 X6R8D5 127 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms