RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 ODAMA1E959 279 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 HLA-EP13747 358 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 HINT1P49773 126 aaPredicted RBP2.71□□□□□ -1.98
USP47-206ENST00000525367 ZNF90Q03938 601 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 PRR9Q5T870 116 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 FAM27BQ5VT28 67 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 AAED1Q7RTV5 226 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 PDZD9Q8IXQ8 264 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 ZNF714Q96N38 554 aa2.71□□□□□ -1.98
USP47-206ENST00000525367 MYH3P11055 1940 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 A0A1W2PNM2 257 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 DPM2O94777 84 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 NAPSAO96009 420 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 IGLV6-57P01721 117 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 IFNA4P05014 189 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 CTSGP08311 255 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 CXCL1P09341 107 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 SCTP09683 121 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 FABP2P12104 132 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 DEFA4P12838 97 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 FUSP35637 526 aaKnown RBP eCLIP2.7□□□□□ -1.98
USP47-206ENST00000525367 RPL35P42766 123 aaKnown RBP2.7□□□□□ -1.98
USP47-206ENST00000525367 ARPP19P56211 112 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 TMEM258P61165 79 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 HBBP68871 147 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 ERHP84090 104 aaKnown RBP2.7□□□□□ -1.98
USP47-206ENST00000525367 MSMO1Q15800 293 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 IGFBP7Q16270 282 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 DEFB128Q7Z7B8 93 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 SLC30A7Q8NEW0 376 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 RNASE11Q8TAA1 199 aaKnown RBP2.7□□□□□ -1.98
USP47-206ENST00000525367 HS3ST2Q9Y278 367 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 CEP152O94986 1710 aa2.7□□□□□ -1.98
USP47-206ENST00000525367 MED1Q15648 1581 aaPredicted RBP2.7□□□□□ -1.98
USP47-206ENST00000525367 SOGA1O94964 1423 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 RIC1Q4ADV7 1423 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 CD109Q6YHK3 1445 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 ODF3BA8MYP8 253 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 C9JAW5 83 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 SDCBPO00560 298 aaPredicted RBP2.69□□□□□ -1.98
USP47-206ENST00000525367 HIST1H2BKO60814 126 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 TNFSF15O95150 251 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 HIST1H2BJP06899 126 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 SDC4P31431 198 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 TCTE3Q8IZS6 198 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 OR8J3Q8NGG0 315 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 OR5D16Q8NGK9 328 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 PKMYT1Q99640 499 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 TPT1P8Q9HAU6 139 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 HIGD1AQ9Y241 93 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 RNF11Q9Y3C5 154 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 MYH2Q9UKX2 1941 aa2.69□□□□□ -1.98
USP47-206ENST00000525367 OVOS2A0A0G2JMS6 1433 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 IGHV1-58A0A0C4DH39 117 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 NDUFA2O43678 99 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 OR2H2O95918 312 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 TRGC1P0CF51 173 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 UBBP0CG47 229 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 DYNLT1P63172 113 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 RELAQ04206 551 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 SLC38A11Q08AI6 406 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 VMA21Q3ZAQ7 101 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 MORN2Q502X0 79 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 IGFL1Q6UW32 110 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 LCN15Q6UWW0 184 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 SOSTDC1Q6X4U4 206 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 PHF5AQ7RTV0 110 aaKnown RBP2.68□□□□□ -1.98
USP47-206ENST00000525367 LINC00305Q7Z4B0 112 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 AQP3Q92482 292 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 BAIAP2Q9UQB8 552 aa2.68□□□□□ -1.98
USP47-206ENST00000525367 MED23Q9ULK4 1368 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 RFPL4AA6NLU0 287 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 HMSDA8MTL9 139 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 RFPL4AL1F8VTS6 287 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 MPC1LP0DKB6 136 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 P0DMU3 169 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 FAM231AP0DMU4 169 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 FAM231CP0DMU5 169 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 CRYGAP11844 174 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 AQP4P55087 323 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 C4orf22Q6V702 233 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 LINC00471Q8N535 108 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 OR4X2Q8NGF9 303 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 OR4K15Q8NH41 348 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 AP1S3Q96PC3 154 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 VPS25Q9BRG1 176 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 TRAPPC8Q9Y2L5 1435 aa2.67□□□□□ -1.98
USP47-206ENST00000525367 ZNF407Q9C0G0 2248 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 IGKV2-24A0A0C4DH68 120 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 MUC21A0A0G2JKD1 596 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 TRBV7-6A0A0J9YX20 115 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 MUC21A0A140T8X8 626 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 A0A1B0GVG6 124 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 OR51F1A6NGY5 319 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 A8MWV9 139 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 SULT1C4O75897 302 aa2.66□□□□□ -1.98
USP47-206ENST00000525367 ZNF705BP0CI00 300 aaPredicted RBP2.66□□□□□ -1.98
USP47-206ENST00000525367 Q9BRP9 147 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms