RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SNNO75324 88 aaPredicted RBP4.31□□□□□ -1.72
NEDD8-203ENST00000524927 HSMCR30P0CW71 290 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 P2RY1P47900 373 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 RBM11P57052 281 aaKnown RBP4.31□□□□□ -1.72
NEDD8-203ENST00000524927 SMIM11AP58511 58 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 STX3Q13277 289 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 KISS1Q15726 138 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 ZSCAN26Q16670 478 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 TRIM16LQ309B1 348 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 TMED4Q7Z7H5 227 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 C1orf158Q8N1D5 194 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 TCTEX1D2Q8WW35 142 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 TSSK6Q9BXA6 273 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 SPACA1Q9HBV2 294 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 WARS2Q9UGM6 360 aaKnown RBP4.31□□□□□ -1.72
NEDD8-203ENST00000524927 USH2AO75445 5202 aa4.31□□□□□ -1.72
NEDD8-203ENST00000524927 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 GEMIN2O14893 280 aaKnown RBP4.3□□□□□ -1.72
NEDD8-203ENST00000524927 ADAP1O75689 374 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 SCGNO76038 276 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 HLA-DRB4P13762 266 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 TSPOP30536 169 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 FGL1Q08830 312 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 CDK10Q15131 360 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 RSU1Q15404 277 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 PRR4Q16378 134 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 OR2B11Q5JQS5 317 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 PSMG4Q5JS54 123 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 IBA57Q5T440 356 aaKnown RBP4.3□□□□□ -1.72
NEDD8-203ENST00000524927 IDO2Q6ZQW0 420 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 OR8J3Q8NGG0 315 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 OR10J6PQ8NGY7 276 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 DCANP1Q8TF63 244 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 FGGYQ96C11 551 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 ISG20L2Q9H9L3 353 aaKnown RBP4.3□□□□□ -1.72
NEDD8-203ENST00000524927 HLA-DRB4X5D2U9 266 aa4.3□□□□□ -1.72
NEDD8-203ENST00000524927 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.29□□□□□ -1.72
NEDD8-203ENST00000524927 LOC107986453A0A1B0GWG9 222 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 HELTA6NFD8 242 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 SERF1AO75920 110 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 YIF1AO95070 293 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 ZNF735P0CB33 412 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 CRHBPP24387 322 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 UNC119Q13432 240 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 WFDC2Q14508 124 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 KCTD21Q4G0X4 260 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 ZNF322Q6U7Q0 402 aaPredicted RBP4.29□□□□□ -1.72
NEDD8-203ENST00000524927 RASSF6Q6ZTQ3 369 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 OR10H4Q8NGA5 316 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 OR13C9Q8NGT0 318 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 OR52N1Q8NH53 320 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 APOL4Q9BPW4 351 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 GINS3Q9BRX5 216 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 EXTL2Q9UBQ6 330 aa4.29□□□□□ -1.72
NEDD8-203ENST00000524927 AK6Q9Y3D8 172 aaKnown RBP4.29□□□□□ -1.72
NEDD8-203ENST00000524927 SAMHD1Q9Y3Z3 626 aaKnown RBP4.29□□□□□ -1.72
NEDD8-203ENST00000524927 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 RBFOX3A6NFN3 312 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 DENRO43583 198 aaKnown RBP4.28□□□□□ -1.72
NEDD8-203ENST00000524927 PRKYO43930 277 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 SC5DO75845 299 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 GADD45GO95257 159 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 NAPSAO96009 420 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 SHBGP04278 402 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 CRYGDP07320 174 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 UBCP0CG48 685 aaKnown RBP4.28□□□□□ -1.72
NEDD8-203ENST00000524927 RPL27AP46776 148 aaKnown RBP4.28□□□□□ -1.72
NEDD8-203ENST00000524927 PSMD7P51665 324 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 FXYD7P58549 80 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 GNG11P61952 73 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 RTL8BQ17RB0 113 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 YIF1BQ5BJH7 314 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 SLC35F2Q8IXU6 374 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 ZNF709Q8N972 641 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 OR10K1Q8NGX5 313 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 OR10AC1Q8NH08 325 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 CPNE2Q96FN4 548 aaPredicted RBP4.28□□□□□ -1.72
NEDD8-203ENST00000524927 Q96MT0 163 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 IL4I1Q96RQ9 567 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 TTTY10Q9BZA0 68 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 ABRACLQ9P1F3 81 aa4.28□□□□□ -1.72
NEDD8-203ENST00000524927 V9GYY5 206 aaPredicted RBP4.28□□□□□ -1.72
NEDD8-203ENST00000524927 A0A1B0GWB2 263 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 A0A1W2PQL4 384 aaPredicted RBP4.27□□□□□ -1.73
NEDD8-203ENST00000524927 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 E7EUB6 86 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 M0R1X1 148 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 CYB5BO43169 146 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 LALBAP00709 142 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 CTSGP08311 255 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 LEPP41159 167 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 TPBGQ13641 420 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 HMGN3Q15651 99 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 MAJINQ3KP22 176 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 KDM4DQ6B0I6 523 aa4.27□□□□□ -1.73
NEDD8-203ENST00000524927 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.27□□□□□ -1.73
NEDD8-203ENST00000524927 MNS1Q8NEH6 495 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms