RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 OR51G1Q8NGK1 321 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 CTDSPLO15194 276 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 HLA-DRB4P13762 266 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 C12orf74Q32Q52 190 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 CLVS1Q8IUQ0 354 aaPredicted RBP11.71□□□□□ -0.53
HIF3A-208ENST00000524533 DTD1Q8TEA8 209 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 RNF125Q96EQ8 232 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 PBDC1Q9BVG4 233 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 PRR13Q9NZ81 148 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 KCNIP3Q9Y2W7 256 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 HLA-DRB4X5D2U9 266 aa11.71□□□□□ -0.53
HIF3A-208ENST00000524533 NKX2-1P43699 371 aaPredicted RBP11.7□□□□□ -0.54
HIF3A-208ENST00000524533 SPCS2Q15005 226 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 LGI3Q8N145 548 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 DIRAS2Q96HU8 199 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 RABL2AQ9UBK7 228 aaPredicted RBP11.7□□□□□ -0.54
HIF3A-208ENST00000524533 HSPB7Q9UBY9 170 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 PFDN2Q9UHV9 154 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 RABL2BQ9UNT1 228 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 U3KQ87 197 aa11.7□□□□□ -0.54
HIF3A-208ENST00000524533 CCR6P51684 374 aa11.69□□□□□ -0.54
HIF3A-208ENST00000524533 KLF9Q13886 244 aaPredicted RBP11.69□□□□□ -0.54
HIF3A-208ENST00000524533 SMCO1Q147U7 214 aa11.69□□□□□ -0.54
HIF3A-208ENST00000524533 OR8G2PQ6IF36 304 aa11.69□□□□□ -0.54
HIF3A-208ENST00000524533 NDUFAF3Q9BU61 184 aa11.69□□□□□ -0.54
HIF3A-208ENST00000524533 MRPS26Q9BYN8 205 aaKnown RBP11.69□□□□□ -0.54
HIF3A-208ENST00000524533 RBKSQ9H477 322 aa11.69□□□□□ -0.54
HIF3A-208ENST00000524533 SCP2D1Q9UJQ7 156 aa11.69□□□□□ -0.54
HIF3A-208ENST00000524533 A0A0B4J2A0 478 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 ANKRD20A5PA0PJZ0 165 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 ZFP92A6NM28 416 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 P0DMU3 169 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 FAM231AP0DMU4 169 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 FAM231CP0DMU5 169 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 ZNF705AQ6ZN79 300 aaPredicted RBP11.68□□□□□ -0.54
HIF3A-208ENST00000524533 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 SLC35E1Q96K37 410 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 SHPKQ9UHJ6 478 aa11.68□□□□□ -0.54
HIF3A-208ENST00000524533 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 AKR1C4P17516 323 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 SRPXP78539 464 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 GDF5OSQ5U4N7 250 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 LYZL2Q7Z4W2 148 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 NEU1Q99519 415 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 SCRT1Q9BWW7 348 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 SAV1Q9H4B6 383 aaPredicted RBP11.67□□□□□ -0.54
HIF3A-208ENST00000524533 MCUBQ9NWR8 336 aa11.67□□□□□ -0.54
HIF3A-208ENST00000524533 CCDC59Q9P031 241 aaKnown RBP11.67□□□□□ -0.54
HIF3A-208ENST00000524533 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 TMEM189A5PLL7 270 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-208ENST00000524533 FABP1P07148 127 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-208ENST00000524533 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ANXA3P12429 323 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ID1P41134 155 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ALDH3B2P48448 385 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 PSMB3P49720 205 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ATP5IP56385 69 aaPredicted RBP11.66□□□□□ -0.54
HIF3A-208ENST00000524533 FXYD7P58549 80 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 DEFB1P60022 68 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 LYZP61626 148 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 SUPT4H1P63272 117 aaKnown RBP11.66□□□□□ -0.54
HIF3A-208ENST00000524533 ZNF90Q03938 601 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 GAMTQ14353 236 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 FOXI2Q6ZQN5 318 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 POM121L12Q8N7R1 296 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 OR1S1Q8NH92 325 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 COQ8AQ8NI60 647 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
HIF3A-208ENST00000524533 WDR12Q9GZL7 423 aaKnown RBP11.66□□□□□ -0.54
HIF3A-208ENST00000524533 IGKV1D-37A0A075B6S9 117 aa11.65□□□□□ -0.54
HIF3A-208ENST00000524533 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
HIF3A-208ENST00000524533 GPX4P36969 197 aaPredicted RBP11.65□□□□□ -0.54
HIF3A-208ENST00000524533 EMP1P54849 157 aa11.65□□□□□ -0.54
HIF3A-208ENST00000524533 RSL24D1Q9UHA3 163 aaKnown RBP11.65□□□□□ -0.54
HIF3A-208ENST00000524533 RFNGQ9Y644 331 aa11.65□□□□□ -0.54
HIF3A-208ENST00000524533 SOCS3O14543 225 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 C1orf194Q5T5A4 169 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 OR4B1Q8NGF8 309 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 DYNC2LI1Q8TCX1 351 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 RAB2BQ8WUD1 216 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 PPP1R14BQ96C90 147 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
HIF3A-208ENST00000524533 FAT2Q9NYQ8 4349 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 PIGBOS1A0A0B4J2F0 54 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 TEX48A0A1B0GUV7 120 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 SNRPGP15A8MWD9 76 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 OR2F1Q13607 317 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 ZNF709Q8N972 641 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 PCLOQ9Y6V0 5065 aa11.63□□□□□ -0.55
HIF3A-208ENST00000524533 DUXBA0A1W2PPF3 345 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 ISLRO14498 428 aa11.62□□□□□ -0.55
HIF3A-208ENST00000524533 IAPPP10997 89 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms