RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	EDDM3A	Q14507	147 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	C3orf36	Q3SXR2	165 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	CT45A1	Q5HYN5	189 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	TMEM108	Q6UXF1	575 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	FAM231D	Q6ZW35	169 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	PRIMA1	Q86XR5	153 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033		Q8N3U1	123 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	MAPK1IP1L	Q8NDC0	245 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	OR1L8	Q8NGR8	309 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	CT45A3	Q8NHU0	189 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	FAM167A-AS1	Q96KT0	104 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	ZNF714	Q96N38	554 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	NABP2	Q9BQ15	211 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	C19orf24	Q9BVV8	132 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	CDIP1	Q9H305	208 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	RAB9B	Q9NP90	201 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	NRN1	Q9NPD7	142 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	TECR	Q9NZ01	308 aa	Known RBP	6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	GNG12	Q9UBI6	72 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	IL19	Q9UHD0	177 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	CDC42EP3	Q9UKI2	254 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	PRND	Q9UKY0	176 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	GOLT1B	Q9Y3E0	138 aa		6.3	□□□□□ -1.4
SPIDR-223	ENST00000524033	IGKV1OR2-108	A0A075B7D4	117 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033		A0A1W2PS18	150 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	SHISA9	B4DS77	424 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	DIRC3	C9JPN6	131 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	ZNF324	O75467	553 aa	Predicted RBP	6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	OR2J3	O76001	311 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	IGHV4-39	P01824	125 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	SAA2	P0DJI9	122 aa	Predicted RBP	6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	IGLC2	P0DOY2	106 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	IGLC3	P0DOY3	106 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	MYOD1	P15172	320 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	CRYBB3	P26998	211 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	GNG4	P50150	75 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	ZNF83	P51522	516 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	RPL19	P84098	196 aa	Known RBP	6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	RAB31	Q13636	194 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	PSG5	Q15238	335 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	LTC4S	Q16873	150 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	SPRN	Q5BIV9	151 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	C19orf35	Q6ZS72	473 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	BAGE3	Q86Y29	109 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	BAGE2	Q86Y30	109 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	VN1R17P	Q8TDU5	208 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	RBM14	Q96PK6	669 aa	Known RBP	6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	RCHY1	Q96PM5	261 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	FAM234A	Q9H0X4	552 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	DCAF16	Q9NXF7	216 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	BET1L	Q9NYM9	111 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	PAM16	Q9Y3D7	125 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	TBL2	Q9Y4P3	447 aa	Known RBP	6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	SLC25A15	Q9Y619	301 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	JMJD1C	Q15652	2540 aa		6.29	□□□□□ -1.4
SPIDR-223	ENST00000524033	IGLV3-9	A0A075B6K5	115 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	KBTBD11-OT1	A0A1B0GTJ5	212 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	HELT	A6NFD8	242 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	NDUFS7	O75251	213 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	CRLF1	O75462	422 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	FSTL3	O95633	263 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	C3orf79	P0CE67	100 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	C8orf88	P0DMB2	117 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	CD40	P25942	277 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	FABP6	P51161	128 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	PRRX1	P54821	245 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	TAS2R45	P59539	299 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	CD69	Q07108	199 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	TIGIT	Q495A1	244 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	COL5A1-AS1	Q5SY13	56 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	STUM	Q69YW2	141 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	DTX2	Q86UW9	622 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	SIGLECL1	Q8N7X8	197 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	C18orf32	Q8TCD1	76 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	GAFA1	Q96PS6	74 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	SLC25A2	Q9BXI2	301 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	SAMD10	Q9BYL1	202 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	ENY2	Q9NPA8	101 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	C1RL	Q9NZP8	487 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	UQCR10	Q9UDW1	63 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	NAT8B	Q9UHF3	227 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	FZR1	Q9UM11	496 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	OR51B2	Q9Y5P1	312 aa		6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	ANK3	Q12955	4377 aa	Known RBP	6.28	□□□□□ -1.4
SPIDR-223	ENST00000524033	COL6A5	A8TX70	2615 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	ATR	Q13535	2644 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV3OR15-7	A0A075B7D8	119 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033		A0A1B0GXF2	115 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	C20orf202	A1L168	122 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033		E7EQL1	145 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	ZNF561-AS1	K7EIQ3	104 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033		M0R1B8	84 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	HYPM	O75409	117 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	NDUFB8	O95169	186 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	IGHV3-13	P01766	116 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	SRI	P30626	198 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	MYCNOS	P40205	109 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	AMT	P48728	403 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	DSCR9	P59020	149 aa		6.27	□□□□□ -1.41
SPIDR-223	ENST00000524033	MLANA	Q16655	118 aa		6.27	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms