RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 KCNIP3Q9Y2W7 256 aa13.54□□□□□ -0.24
PTP4A3-206ENST00000524028 IGHV4-4A0A075B6R2 117 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 AKR1C4P17516 323 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 CCR6P51684 374 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 SNRPD3P62318 126 aaKnown RBP13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 C12orf74Q32Q52 190 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 ZNF767PQ75MW2 155 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 NOXA1Q86UR1 476 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 LGI3Q8N145 548 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 CACFD1Q9UGQ2 172 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 U3KQ87 197 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 HECTD4Q9Y4D8 3996 aa13.53□□□□□ -0.24
PTP4A3-206ENST00000524028 IGKV1D-37A0A075B6S9 117 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 A0A0B4J2A0 478 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 DEFB1P60022 68 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 KLF9Q13886 244 aaPredicted RBP13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 RNF125Q96EQ8 232 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 SOSTQ9BQB4 213 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 RABL2AQ9UBK7 228 aaPredicted RBP13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 SHPKQ9UHJ6 478 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 SCP2D1Q9UJQ7 156 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 RABL2BQ9UNT1 228 aa13.52□□□□□ -0.25
PTP4A3-206ENST00000524028 DNAH6Q9C0G6 4158 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 ZNF90Q03938 601 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 GAMTQ14353 236 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 GDF5OSQ5U4N7 250 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 GSG1LQ6UXU4 331 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 PBDC1Q9BVG4 233 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 SCRT1Q9BWW7 348 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 MCUBQ9NWR8 336 aa13.51□□□□□ -0.25
PTP4A3-206ENST00000524028 HLA-DRB4P13762 266 aa13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 NKX2-1P43699 371 aaPredicted RBP13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 NUTF2P61970 127 aaKnown RBP13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 RAB2BQ8WUD1 216 aa13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 SCGB3A2Q96PL1 93 aa13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 C1QTNF4Q9BXJ3 329 aa13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 WDR12Q9GZL7 423 aaKnown RBP13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 SLIRPQ9GZT3 109 aaKnown RBP13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 RSL24D1Q9UHA3 163 aaKnown RBP13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 HLA-DRB4X5D2U9 266 aa13.5□□□□□ -0.25
PTP4A3-206ENST00000524028 TNFSF8P32971 234 aa13.49□□□□□ -0.25
PTP4A3-206ENST00000524028 TMBIM6P55061 237 aa13.49□□□□□ -0.25
PTP4A3-206ENST00000524028 RNF126Q9BV68 326 aa13.49□□□□□ -0.25
PTP4A3-206ENST00000524028 DEFB131BA0A096LNP1 70 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 ZFP92A6NM28 416 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 IGKV3-20P01619 116 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 GPX4P36969 197 aaPredicted RBP13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 FXYD7P58549 80 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 OR8G2PQ6IF36 304 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 ZNF705AQ6ZN79 300 aaPredicted RBP13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 CENPSQ8N2Z9 138 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 OR1S1Q8NH92 325 aa13.48□□□□□ -0.25
PTP4A3-206ENST00000524028 FABP12A6NFH5 140 aa13.47□□□□□ -0.25
PTP4A3-206ENST00000524028 SOCS3O14543 225 aa13.47□□□□□ -0.25
PTP4A3-206ENST00000524028 PITX3O75364 302 aa13.47□□□□□ -0.25
PTP4A3-206ENST00000524028 LINC00052Q96N35 136 aa13.47□□□□□ -0.25
PTP4A3-206ENST00000524028 BCL7BQ9BQE9 202 aa13.47□□□□□ -0.25
PTP4A3-206ENST00000524028 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 AMBPP02760 352 aa13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 ANXA3P12429 323 aa13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 ATP5IP56385 69 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 LYZP61626 148 aa13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 SRPXP78539 464 aa13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 SLC35E1Q96K37 410 aa13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 NEU1Q99519 415 aa13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 SAV1Q9H4B6 383 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-206ENST00000524028 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 H3BMQ9 156 aa13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 IAPPP10997 89 aa13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 NUP62P37198 522 aaPredicted RBP13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 OR2F1Q13607 317 aa13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 TMED4Q7Z7H5 227 aa13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 ZNF709Q8N972 641 aa13.45□□□□□ -0.26
PTP4A3-206ENST00000524028 KIAA1109Q2LD37 5005 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 SNRPGP15A8MWD9 76 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 PSMB3P49720 205 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 C1orf194Q5T5A4 169 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 FOXI2Q6ZQN5 318 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 TRIM63Q969Q1 353 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 TRGV9Q99603 122 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 PFDN2Q9UHV9 154 aa13.44□□□□□ -0.26
PTP4A3-206ENST00000524028 IGHV3OR16-12A0A075B7B8 117 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 F6UB75 175 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 ID1P41134 155 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 EMP1P54849 157 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 ZNF79Q15937 498 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 TMEM128Q5BJH2 165 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 MCFD2Q8NI22 146 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 C17orf77Q96MU5 243 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 CLUHP3Q96NS8 147 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 SLC35B3Q9H1N7 401 aa13.43□□□□□ -0.26
PTP4A3-206ENST00000524028 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
PTP4A3-206ENST00000524028 LRTM2Q8N967 370 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms