RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PITX3O75364 302 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 ZNF90Q03938 601 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 GAMTQ14353 236 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 MORN3Q6PF18 240 aaPredicted RBP15.07■□□□□ 0
SDCBP-209ENST00000522243 RNF125Q96EQ8 232 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 SLC35E1Q96K37 410 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 RAB40CQ96S21 281 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 CLEC5AQ9NY25 188 aa15.07■□□□□ 0
SDCBP-209ENST00000522243 PAIP2BQ9ULR5 123 aaKnown RBP15.07■□□□□ 0
SDCBP-209ENST00000522243 PLECQ15149 4684 aaKnown RBP15.07■□□□□ 0
SDCBP-209ENST00000522243 IGKV1D-37A0A075B6S9 117 aa15.06■□□□□ 0
SDCBP-209ENST00000522243 DUXBA0A1W2PPF3 345 aa15.06■□□□□ 0
SDCBP-209ENST00000522243 SPP1P10451 314 aa15.06■□□□□ 0
SDCBP-209ENST00000522243 SIGLEC15Q6ZMC9 328 aa15.06■□□□□ 0
SDCBP-209ENST00000522243 CCDC190Q86UF4 302 aa15.06■□□□□ 0
SDCBP-209ENST00000522243 MFFQ9GZY8 342 aa15.06■□□□□ 0
SDCBP-209ENST00000522243 FAM90A26D6RGX4 464 aa15.05■□□□□ -0
SDCBP-209ENST00000522243 GPX4P36969 197 aaPredicted RBP15.05■□□□□ -0
SDCBP-209ENST00000522243 PPP1R1AQ13522 171 aa15.05■□□□□ -0
SDCBP-209ENST00000522243 SLC25A21Q9BQT8 299 aaPredicted RBP15.05■□□□□ -0
SDCBP-209ENST00000522243 NRN1Q9NPD7 142 aa15.05■□□□□ -0
SDCBP-209ENST00000522243 PIGBOS1A0A0B4J2F0 54 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 SFT2D2O95562 160 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 HOXB5P09067 269 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 ATP5IP56385 69 aaPredicted RBP15.04■□□□□ -0
SDCBP-209ENST00000522243 OR2F1Q13607 317 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 GSG1LQ6UXU4 331 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 LRTM2Q8N967 370 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 Q8NAQ8 132 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 MAGT1Q9H0U3 335 aa15.04■□□□□ -0
SDCBP-209ENST00000522243 RBM38Q9H0Z9 239 aaKnown RBP15.04■□□□□ -0
SDCBP-209ENST00000522243 IGHV4-28A0A0C4DH34 117 aa15.03■□□□□ -0
SDCBP-209ENST00000522243 RBMY1A1P0DJD3 496 aaKnown RBP15.03■□□□□ -0
SDCBP-209ENST00000522243 RBMY1CP0DJD4 496 aa15.03■□□□□ -0
SDCBP-209ENST00000522243 LYZP61626 148 aa15.03■□□□□ -0
SDCBP-209ENST00000522243 SNRPD3P62318 126 aaKnown RBP15.03■□□□□ -0
SDCBP-209ENST00000522243 RAB11AP62491 216 aa15.03■□□□□ -0
SDCBP-209ENST00000522243 RBMY1FQ15415 496 aaKnown RBP15.03■□□□□ -0
SDCBP-209ENST00000522243 TMEM41BQ5BJD5 291 aa15.03■□□□□ -0
SDCBP-209ENST00000522243 CENPSQ8N2Z9 138 aa15.03■□□□□ -0
SDCBP-209ENST00000522243 EPPK1P58107 5090 aaKnown RBP15.02■□□□□ -0
SDCBP-209ENST00000522243 WRBO00258 174 aa15.02■□□□□ -0
SDCBP-209ENST00000522243 SRRQ9GZT4 340 aa15.02■□□□□ -0
SDCBP-209ENST00000522243 TMED3Q9Y3Q3 217 aa15.02■□□□□ -0
SDCBP-209ENST00000522243 X6R8D5 127 aa15.02■□□□□ -0
SDCBP-209ENST00000522243 MED6O75586 246 aa15.01□□□□□ -0.01
SDCBP-209ENST00000522243 SLC25A6P12236 298 aa15.01□□□□□ -0.01
SDCBP-209ENST00000522243 DEFB1P60022 68 aa15.01□□□□□ -0.01
SDCBP-209ENST00000522243 GGNBP1Q5YKI7 109 aa15.01□□□□□ -0.01
SDCBP-209ENST00000522243 OR8G2PQ6IF36 304 aa15.01□□□□□ -0.01
SDCBP-209ENST00000522243 CSNK1G2-AS1Q8NCQ2 148 aa15.01□□□□□ -0.01
SDCBP-209ENST00000522243 ZNF705EA8MWA4 302 aaPredicted RBP15□□□□□ -0.01
SDCBP-209ENST00000522243 SNRPGP15A8MWD9 76 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 SYNGR2O43760 224 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 MIFP14174 115 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 BAK1Q16611 211 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 SPANXN2Q5MJ10 180 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 RPP25LQ8N5L8 163 aaKnown RBP15□□□□□ -0.01
SDCBP-209ENST00000522243 DEDD2Q8WXF8 326 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 PPP1R14BQ96C90 147 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 TRGV9Q99603 122 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 TBC1D24Q9ULP9 559 aa15□□□□□ -0.01
SDCBP-209ENST00000522243 IGKV1OR2-108A0A075B7D4 117 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 LINC00854A0A1B0GVQ3 168 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 H3BMM0 161 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 DEDDO75618 318 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 FABP1P07148 127 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 NUP62P37198 522 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-209ENST00000522243 INPP1P49441 399 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 C2CD4CQ8TF44 421 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 LINC00052Q96N35 136 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 WDR12Q9GZL7 423 aaKnown RBP14.99□□□□□ -0.01
SDCBP-209ENST00000522243 SEPSECSQ9HD40 501 aaKnown RBP14.99□□□□□ -0.01
SDCBP-209ENST00000522243 XCL2Q9UBD3 114 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 PFDN2Q9UHV9 154 aa14.99□□□□□ -0.01
SDCBP-209ENST00000522243 ELOA3CA0A087WX78 387 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-209ENST00000522243 SPANXN5Q5MJ07 72 aa14.98□□□□□ -0.01
SDCBP-209ENST00000522243 GDF5OSQ5U4N7 250 aa14.98□□□□□ -0.01
SDCBP-209ENST00000522243 LGALS9CQ6DKI2 356 aa14.98□□□□□ -0.01
SDCBP-209ENST00000522243 CIB3Q96Q77 187 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-209ENST00000522243 FLVCR2Q9UPI3 526 aa14.98□□□□□ -0.01
SDCBP-209ENST00000522243 H3BP45 60 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 ADAP1O75689 374 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 IGKV3-20P01619 116 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 HLA-DMBP28068 263 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 FXYD7P58549 80 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 NUTF2P61970 127 aaKnown RBP14.97□□□□□ -0.01
SDCBP-209ENST00000522243 RPP30P78346 268 aaKnown RBP14.97□□□□□ -0.01
SDCBP-209ENST00000522243 TRIQKQ629K1 86 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 THAP8Q8NA92 274 aa14.97□□□□□ -0.01
SDCBP-209ENST00000522243 C9orf170A2RU37 121 aa14.96□□□□□ -0.01
SDCBP-209ENST00000522243 IGLL5B9A064 214 aa14.96□□□□□ -0.01
SDCBP-209ENST00000522243 PRSS46E5RG02 174 aa14.96□□□□□ -0.01
SDCBP-209ENST00000522243 HLA-DRB4P13762 266 aa14.96□□□□□ -0.01
SDCBP-209ENST00000522243 NKX2-1P43699 371 aaPredicted RBP14.96□□□□□ -0.01
SDCBP-209ENST00000522243 HRH4Q9H3N8 390 aa14.96□□□□□ -0.01
SDCBP-209ENST00000522243 HLA-DRB4X5D2U9 266 aa14.96□□□□□ -0.01
SDCBP-209ENST00000522243 ZNF701M0R085 212 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-209ENST00000522243 NDUFB6O95139 128 aa14.95□□□□□ -0.02
SDCBP-209ENST00000522243 GATA2P23769 480 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms