RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PRR20BP86481 221 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 PRR20AP86496 221 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 NSUN5P1Q3KNT7 163 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 GCSAMLQ5JQS6 135 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 SPSB3Q6PJ21 355 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 GNPNAT1Q96EK6 184 aaPredicted RBP10.29□□□□□ -0.76
CLK4-210ENST00000522136 VSIRQ9H7M9 311 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 SLC39A9Q9NUM3 307 aa10.29□□□□□ -0.76
CLK4-210ENST00000522136 PUS1Q9Y606 427 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLK4-210ENST00000522136 YIF1AO95070 293 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 TOMM40O96008 361 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 B2MP61769 119 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 FFAR4Q5NUL3 377 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 DOK5Q9P104 306 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 TIMM9Q9Y5J7 89 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 WNK1Q9H4A3 2382 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 GGCTO75223 188 aaKnown RBP10.28□□□□□ -0.76
CLK4-210ENST00000522136 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
CLK4-210ENST00000522136 SELENOTP62341 195 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 IFITM2Q01629 132 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 ZNF600Q6ZNG1 722 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 OR11H1Q8NG94 326 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 Q8WTZ3 238 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
CLK4-210ENST00000522136 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
CLK4-210ENST00000522136 PSMG3Q9BT73 122 aaPredicted RBP10.28□□□□□ -0.76
CLK4-210ENST00000522136 SCGB2A1O75556 95 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 TSPAN15O95858 294 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 SEC11BP0C7V7 166 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 ORM2P19652 201 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 LYZP61626 148 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 TOMM20LQ6UXN7 152 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 UNQ9165/PRO28630Q6UXU0 137 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 RAX2Q96IS3 184 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 PBDC1Q9BVG4 233 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 TENM1Q9UKZ4 2725 aa10.27□□□□□ -0.77
CLK4-210ENST00000522136 IL4P05112 153 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 SLURP1P55000 103 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 RAB2AP61019 212 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 FAM209BQ5JX69 171 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 TEX261Q6UWH6 196 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 OR1B1Q8NGR6 318 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 OR1N2Q8NGR9 330 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 CITED1Q99966 193 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 WI2-2373I1.2A0A1W2PRP0 233 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 ZNF207O43670 478 aaKnown RBP10.26□□□□□ -0.77
CLK4-210ENST00000522136 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLK4-210ENST00000522136 FABP1P07148 127 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
CLK4-210ENST00000522136 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
CLK4-210ENST00000522136 USF2Q15853 346 aaPredicted RBP10.26□□□□□ -0.77
CLK4-210ENST00000522136 RPEL1Q2QD12 228 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 PATE2Q6UY27 113 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 NDUFA11Q86Y39 141 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 DPF1Q92782 380 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 C20orf24Q9BUV8 137 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
CLK4-210ENST00000522136 ZNF320A2RRD8 509 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 LINC01619G3V211 115 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 SERF2P84101 59 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 Q6ZRG5 221 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 ZNF680Q8NEM1 530 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 TMEM37Q8WXS4 190 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 UHRF2Q96PU4 802 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 KCNIP2Q9NS61 270 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 CCL24O00175 119 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 OR5G3P0C626 314 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 FHITP49789 147 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 PHYHIPLQ96FC7 376 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 RPRMQ9NS64 109 aa10.25□□□□□ -0.77
CLK4-210ENST00000522136 NDUFA4O00483 81 aa10.24□□□□□ -0.77
CLK4-210ENST00000522136 SYNJ2BPP57105 145 aa10.24□□□□□ -0.77
CLK4-210ENST00000522136 ACOT6Q3I5F7 207 aaPredicted RBP10.24□□□□□ -0.77
CLK4-210ENST00000522136 EIF5AL1Q6IS14 154 aaKnown RBP10.24□□□□□ -0.77
CLK4-210ENST00000522136 GPHB5Q86YW7 130 aa10.24□□□□□ -0.77
CLK4-210ENST00000522136 OR10G4Q8NGN3 311 aa10.24□□□□□ -0.77
CLK4-210ENST00000522136 OR10G9Q8NGN4 311 aa10.24□□□□□ -0.77
CLK4-210ENST00000522136 OR10G7Q8NGN6 311 aa10.24□□□□□ -0.77
CLK4-210ENST00000522136 COX7A2P2O60397 106 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 HYPMO75409 117 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 M6PRP20645 277 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 EDN2P20800 178 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 ZP3P21754 424 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 PLP1P60201 277 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 TMEM41BQ5BJD5 291 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 MORN5Q5VZ52 161 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 C12orf54Q6X4T0 127 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 RPP25LQ8N5L8 163 aaKnown RBP10.23□□□□□ -0.77
CLK4-210ENST00000522136 SEPSECSQ9HD40 501 aaKnown RBP10.23□□□□□ -0.77
CLK4-210ENST00000522136 DNAJC4Q9NNZ3 241 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
CLK4-210ENST00000522136 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
CLK4-210ENST00000522136 SULT1A2P50226 295 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms