RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 TRAV8-2A0A0B4J237 113 aa13.37□□□□□ -0.27
USP42-207ENST00000521713 IGHV2-26A0A0B4J1V2 119 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
USP42-207ENST00000521713 S4R3C0 116 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 FAM181BA6NEQ2 426 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 IGHV3-11P01762 117 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 TFF1P04155 84 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 OR9G9P0C7N8 305 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 IGHV1-8P0DP01 117 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 TMEM170BQ5T4T1 132 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 GFI1Q99684 422 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 M0R1W7 72 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 RIPPLY3P57055 190 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 NXT2Q9NPJ8 142 aaKnown RBP13.36□□□□□ -0.27
USP42-207ENST00000521713 BEX4Q9NWD9 120 aaPredicted RBP13.36□□□□□ -0.27
USP42-207ENST00000521713 TDGF1P3P51864 188 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 PRR30Q53SZ7 412 aaPredicted RBP13.36□□□□□ -0.27
USP42-207ENST00000521713 MEIG1Q5JSS6 88 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 C8orf46Q8TAG6 207 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 RNF5Q99942 180 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
USP42-207ENST00000521713 IGHV3-49A0A0A0MS15 119 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 LINC01549A6NIU2 74 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 C9JCJ5 164 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 ERVK11-1P61568 191 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 SP5Q6BEB4 398 aaPredicted RBP13.35□□□□□ -0.27
USP42-207ENST00000521713 PVRIGQ6DKI7 326 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 WDR83OSQ9Y284 106 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 DPM2O94777 84 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 APOMO95445 188 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 LYL1P12980 280 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 CD69Q07108 199 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 OCC1Q8TAD7 63 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 FOXI3A8MTJ6 420 aaPredicted RBP13.35□□□□□ -0.27
USP42-207ENST00000521713 H7C1H1 209 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 TMEM200BQ69YZ2 307 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
USP42-207ENST00000521713 PRB3Q04118 309 aaPredicted RBP13.34□□□□□ -0.27
USP42-207ENST00000521713 C3orf36Q3SXR2 165 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 GAGE13Q4V321 117 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 TMEM155Q4W5P6 130 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 UBE2L6O14933 153 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 LDLRAD4O15165 306 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 NAPSAO96009 420 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 TCF15Q12870 199 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 FER1L6-AS1Q8NA97 138 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 PSPNO60542 156 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 SELLP14151 372 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 CD24P25063 80 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 CEACAM8P31997 349 aaPredicted RBP13.34□□□□□ -0.27
USP42-207ENST00000521713 RHOGP84095 191 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 PRCDQ00LT1 54 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 TSC2P49815 1807 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 IGKV1-27A0A075B6S5 117 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 A0A0A6YYD4 124 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 A8MWV9 139 aa13.34□□□□□ -0.27
USP42-207ENST00000521713 RNASE7Q9H1E1 156 aaKnown RBP13.34□□□□□ -0.27
USP42-207ENST00000521713 PCNX2A6NKB5 2137 aa13.33□□□□□ -0.27
USP42-207ENST00000521713 ABCA1O95477 2261 aa13.33□□□□□ -0.27
USP42-207ENST00000521713 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.27
USP42-207ENST00000521713 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.27
USP42-207ENST00000521713 IGKV3-20P01619 116 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 GCSAMLQ5JQS6 135 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 ZNF664Q8N3J9 261 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 WDR81Q562E7 1941 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 A8MWP6 167 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 HOXA3O43365 443 aaPredicted RBP13.33□□□□□ -0.28
USP42-207ENST00000521713 CD177Q8N6Q3 437 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 A0A1W2PRX2 142 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 C20orf144Q9BQM9 153 aa13.33□□□□□ -0.28
USP42-207ENST00000521713 E7EQL1 145 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 J3QKU1 62 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 GZMBP10144 247 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 ITLN2Q8WWU7 325 aaPredicted RBP13.32□□□□□ -0.28
USP42-207ENST00000521713 ZNF585BQ52M93 769 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 TPTE2P1Q5T6R2 138 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 DMRTA2Q96SC8 542 aa13.32□□□□□ -0.28
USP42-207ENST00000521713 IGHV3-66A0A0C4DH42 116 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 ESDP10768 282 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 HGFACQ04756 655 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 ZFAND6Q6FIF0 208 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 HEATR1Q9H583 2144 aaKnown RBP13.31□□□□□ -0.28
USP42-207ENST00000521713 LINC01551Q86U37 167 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 Q9H3A6 140 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 PROK2Q9HC23 129 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 PTPRDP23468 1912 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 H3BRM9 83 aa13.31□□□□□ -0.28
USP42-207ENST00000521713 CEACAM4O75871 244 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms