RNA–Protein interactions for RNA: ENST00000521597.1

TNFRSF11B-203, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 2

Gene TNFRSF11B, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-203ENST00000521597 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 NDFIP1Q9BT67 221 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 LPAR5Q9H1C0 372 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 OR51I2Q9H344 312 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 PTGES2Q9H7Z7 377 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 SLC25A22Q9H936 323 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 EFCAB1Q9HAE3 211 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 CACYBPQ9HB71 228 aaKnown RBP2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 NAT8BQ9UHF3 227 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 VAX2Q9UIW0 290 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 PKIGQ9Y2B9 76 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 LAMTOR2Q9Y2Q5 125 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 F11RQ9Y624 299 aaKnown RBP2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 ALPK2Q86TB3 2170 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 HEATR5AQ86XA9 2040 aa2.54□□□□□ -2
TNFRSF11B-203ENST00000521597 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 RYR3Q15413 4870 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 TRAV30A0A087WSZ9 112 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 TRAV38-1A0A0B4J264 116 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 TMEM218A2RU14 115 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SIGLEC16A6NMB1 481 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 A8MWP6 167 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 I3L521 148 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SPAG7O75391 227 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 REM1O75628 298 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 EPPINO95925 133 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 NRASP01111 189 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 IGKV1D-16P01601 117 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 IGLV1-47P01700 117 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 IGHG2P01859 326 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 OPN1SWP03999 348 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SMIM17P0DL12 118 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 ZNF32P17041 273 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 RPL7P18124 248 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 CRYGSP22914 178 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 COX7A1P24310 79 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 CNTFRP26992 372 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 BLVRBP30043 206 aaPredicted RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 OPRM1P35372 400 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 G6PCP35575 357 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 CTRLP40313 264 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 GABRA2P47869 451 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 RAB5CP51148 216 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 ZNF138P52744 262 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 H2BFSP57053 126 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 COPZ1P61923 177 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 CDK6Q00534 326 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 HIST1H1AQ02539 215 aaPredicted RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 PRDX1Q06830 199 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 LOXL1Q08397 574 aaPredicted RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 EBPQ15125 230 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 LCE1CQ5T751 118 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 LINC00173Q6ZV60 143 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 ZNF550Q7Z398 422 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SNX29P2Q8IUI4 249 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 H1FOOQ8IZA3 346 aaPredicted RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 ZNF615Q8N8J6 731 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 OR13C8Q8NGS7 320 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 ZNF418Q8TF45 676 aaPredicted RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 FAM3DQ96BQ1 224 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 PLEKHB2Q96CS7 222 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 FMC1Q96HJ9 113 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 PEBP4Q96S96 227 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 NRIP2Q9BQI9 281 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 PSMG3Q9BT73 122 aaPredicted RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SNRNP25Q9BV90 132 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 GABARAPL3Q9BY60 117 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 TTTY12Q9BZ98 90 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SMIM3Q9BZL3 60 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 CHST6Q9GZX3 395 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 RNASE7Q9H1E1 156 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 OR51E2Q9H255 320 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 CDC42EP4Q9H3Q1 356 aaKnown RBP2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 PRTFDC1Q9NRG1 225 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 UQCC1Q9NVA1 299 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 SNX12Q9UMY4 172 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 RFNGQ9Y644 331 aa2.53□□□□□ -2
TNFRSF11B-203ENST00000521597 TRGV5A0A0B4J1U4 118 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 A0A0G2JMM0 328 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 A0A1W2PPB8 328 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 A0A1W2PRS3 328 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 FABP5P3A8MUU1 101 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 KIR3DP1A8MWS1 328 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 M0R2Z0 102 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 UPK1AO00322 258 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 UBFD1O14562 309 aaKnown RBP2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 CCL25O15444 150 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 RBFOX2O43251 390 aaKnown RBP eCLIP2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 NPIPB7O75200 414 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 DHRS3O75911 302 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 NDUFC2O95298 119 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 PTHP01270 115 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 HLA-DQB2P05538 268 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 CSN2P05814 226 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 LGALS1P09382 135 aaKnown RBP2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 ERGP11308 486 aa2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 RCC1P18754 421 aaPredicted RBP2.52□□□□□ -2.01
TNFRSF11B-203ENST00000521597 MDKP21741 143 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms