RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 IGHV1-18A0A0C4DH31 117 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 GPR183P32249 361 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 CCL8P80075 99 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 BVES-AS1Q5T3Y7 98 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 RASL11AQ6T310 242 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 BHLHA15Q7RTS1 189 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 A0A1W2PRD5 423 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 A0A1W2PRF3 423 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 A0A1W2PRM7 423 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 C7orf71A4D174 169 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 CT45A6P0DMU7 189 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 CT45A5P0DMU8 189 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 CT45A7P0DMV0 189 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 DDB2Q92466 427 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 TMUB1Q9BVT8 246 aa10.41□□□□□ -0.74
TRAPPC9-208ENST00000520857 IGKV3-15P01624 115 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 APOHP02749 345 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 C17orf58Q2M2W7 97 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 GOLT1AQ6ZVE7 132 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 SRSF12Q8WXF0 261 aaKnown RBP10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 PEF1Q9UBV8 284 aaKnown RBP10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 WISP2O76076 250 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 AARDQ4LEZ3 155 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 FAM167A-AS1Q96KT0 104 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 ZNF257Q9Y2Q1 563 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 K7EP13 123 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 CCL3L1P16619 93 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 CSN1S1P47710 185 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 RBPMS2Q6ZRY4 209 aaKnown RBP10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 CACNG8Q8WXS5 425 aa10.4□□□□□ -0.74
TRAPPC9-208ENST00000520857 KIR2DL2P43627 348 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 ANKRD39Q53RE8 183 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 CIARTQ8N365 385 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 SARAFQ96BY9 339 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 FAM87AP0C7U9 286 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 PLGLAQ15195 96 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 TM4SF20Q53R12 229 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 MDS2Q8NDY4 140 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 TCRBV4S1A1TA0A5B7 111 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 FBLL1A6NHQ2 334 aaKnown RBP10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 RBP4P02753 201 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 FXYD7P58549 80 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 ATP5L2Q7Z4Y8 100 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 STXBP6Q8NFX7 210 aa10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 PTPRZ1P23471 2315 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC9-208ENST00000520857 H3BUT2 72 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 RPL24P83731 157 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 WDFY4Q6ZS81 3184 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 ABCA4P78363 2273 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 FNDC10F2Z333 226 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 NMUP48645 174 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 FAM231DQ6ZW35 169 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 ZCCHC24Q8N2G6 241 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 TEX45Q8NA69 505 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 WIPF2Q8TF74 440 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 Q9H3A6 140 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 HIST1H1AQ02539 215 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 PRB3Q04118 309 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 KLF5Q13887 457 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 VMA21Q3ZAQ7 101 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 CHCHD1Q96BP2 118 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 F11RQ9Y624 299 aaKnown RBP10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 ACACAQ13085 2346 aa10.38□□□□□ -0.75
TRAPPC9-208ENST00000520857 TRAV8-6A0A0B4J262 113 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 VSTM2AQ8TAG5 236 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 VWC2LB2RUY7 222 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 E7EUB6 86 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 OR2J3O76001 311 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 ACP1P24666 158 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 PATE2Q6UY27 113 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 WFDC3Q8IUB2 231 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 RIF1Q5UIP0 2472 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 PET117Q6UWS5 81 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 DEFB125Q8N687 156 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 OSR1Q8TAX0 266 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 RPUSD1Q9UJJ7 312 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-208ENST00000520857 TNRC6BQ9UPQ9 1833 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 WT1-ASQ06250 92 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 LINC00322Q6ZN03 302 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 THYN1Q9P016 225 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 TMEM265A0A087WTH1 108 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 SAP30O75446 220 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 MSMPQ1L6U9 139 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 EXOC3-AS1Q8N2X6 119 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 OR4C13Q8NGP0 309 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 CCL17Q92583 94 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 NKX2-8O15522 239 aa10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-208ENST00000520857 RIGQ13278 110 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms