RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 MARCH1Q8TCQ1 289 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 MRGPRFQ96AM1 343 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 ATP6V0BQ99437 205 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 MLST8Q9BVC4 326 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 C21orf62Q9NYP8 219 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 C14orf166Q9Y224 244 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 NSG2Q9Y328 171 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 OR51B2Q9Y5P1 312 aa6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 F11RQ9Y624 299 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-221ENST00000520339 IGHV3-21A0A0B4J1V1 117 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 OR2T8A6NH00 312 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 K7EIM0 57 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 GPR31O00270 319 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 JTBO76095 146 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 NXPH3O95157 252 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 KRASP01116 189 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 ANXA3P12429 323 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 G6PCP35575 357 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 SUMO2P61956 95 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 DHRS2Q13268 280 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 SPSB3Q6PJ21 355 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 CMTM1Q8IZ96 169 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 ZNF431Q8TF32 576 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 SCARB1Q8WTV0 552 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 LSM10Q969L4 123 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 BSCL2Q96G97 398 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 ZNF414Q96IQ9 312 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 HYLS1Q96M11 299 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 SPAG8Q99932 426 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 CHRDL1Q9BU40 450 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 HINT2Q9BX68 163 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 FXYD6Q9H0Q3 95 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 MGAT4CQ9UBM8 478 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 PRNDQ9UKY0 176 aa6.88□□□□□ -1.31
CTNNA1-221ENST00000520339 RAB19A4D1S5 217 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 K7EMT4 169 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 NDUFA4O00483 81 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 IFNA7P01567 189 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 CTSDP07339 412 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 AKR1C4P17516 323 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 TAS2R60P59551 318 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 PPP1R1AQ13522 171 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 PHLDA2Q53GA4 152 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 FAM90A2PQ658T7 463 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 LYG2Q86SG7 212 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 SLC24A4Q8NFF2 622 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 RBPMSQ93062 196 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 GSN-AS1Q9NRJ2 163 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 FAM212BQ9NTI7 297 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 TMEM14BQ9NUH8 114 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 FKBP11Q9NYL4 201 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 GPR132Q9UNW8 380 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 TP53TG1Q9Y2A0 90 aa6.87□□□□□ -1.31
CTNNA1-221ENST00000520339 C9orf170A2RU37 121 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 UBE2CO00762 179 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 CIDEAO60543 219 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 CTSGP08311 255 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 RNF212Q495C1 297 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 TMEM128Q5BJH2 165 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 DNLZQ5SXM8 178 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 LAMTOR1Q6IAA8 161 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 LPCAT3Q6P1A2 487 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 Q6ZWC4 215 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 C12orf45Q8N5I9 185 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 CCDC71LQ8N9Z2 235 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 OR1P1Q8NH06 330 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 TMEM56Q96MV1 263 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 PDCD10Q9BUL8 212 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 C20orf24Q9BUV8 137 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 UBQLN2Q9UHD9 624 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 SMPXQ9UHP9 88 aa6.86□□□□□ -1.31
CTNNA1-221ENST00000520339 IGHV3OR16-8A0A075B7F1 116 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 KIR2DL5BA0A0G2JN68 375 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 KIR2DL5BA0A0G2JPC4 375 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 C15orf61A6NNL5 157 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 C15orf62A8K5M9 175 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 HSBP1L1C9JCN9 74 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 I3L2K1 104 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 J3KRW8 73 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 GOSR2O14653 212 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 ZNF207O43670 478 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 SFT2D2O95562 160 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 IFNA10P01566 189 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 IGKV1-39P01597 117 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 IGKV1D-39P04432 117 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 GIPP09681 153 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 CXCL3P19876 107 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 C4BPBP20851 252 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 FCGR2BP31994 310 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 NUP62P37198 522 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 APOC4P55056 127 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 EWSR1Q01844 656 aaKnown RBP eCLIP6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
CTNNA1-221ENST00000520339 Q56UQ5 140 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms