RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
CTNNA1-218ENST00000519768 AP3M1Q9Y2T2 418 aa3.18□□□□□ -1.9
CTNNA1-218ENST00000519768 CSDC2Q9Y534 153 aaKnown RBP3.18□□□□□ -1.9
CTNNA1-218ENST00000519768 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 IGLV4-3A0A075B6K6 122 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 FOXI3A8MTJ6 420 aaPredicted RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF705FA8MVS1 300 aaPredicted RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 J3QLW9 94 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 K7EMT4 169 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 NUPL2O15504 423 aaKnown RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 CRYZL1O95825 349 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 IFNA5P01569 189 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 IGHV3-48P01763 117 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 CTSGP08311 255 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 HTR1AP08908 422 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF705DP0CH99 300 aaPredicted RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF705BP0CI00 300 aaPredicted RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF19P17023 458 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 RAB3AP20336 220 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 RPL30P62888 115 aaKnown RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 MAPRE2Q15555 327 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 USF2Q15853 346 aaPredicted RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 TIGITQ495A1 244 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 GDF5OSQ5U4N7 250 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 NXNL2Q5VZ03 156 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 XAF1Q6GPH4 301 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 GLIPR1L1Q6UWM5 242 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 C1orf158Q8N1D5 194 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 OR10W1Q8NGF6 305 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 OR5D14Q8NGL3 314 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 PTX4Q96A99 478 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 TM2D1Q9BX74 207 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 SELENOIQ9C0D9 397 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 REEP1Q9H902 201 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 EFCAB1Q9HAE3 211 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 RNF24Q9Y225 148 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF257Q9Y2Q1 563 aa3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
CTNNA1-218ENST00000519768 TRAV8-7A0A075B6U6 113 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 TRBV7-1A0A0A6YYK4 115 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 TRDCB7Z8K6 153 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 H7C423 109 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 J3QRK9 145 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 NDUFA4O00483 81 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 ITGB1BP1O14713 200 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 TMEM50AO95807 157 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 NAPSAO96009 420 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 APOA2P02652 100 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 GTF2F2P13984 249 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 PTBP1P26599 531 aaKnown RBP eCLIP3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 HTR2CP28335 458 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 ZNF93P35789 620 aaPredicted RBP3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 NUP62P37198 522 aaPredicted RBP3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 RPL27AP46776 148 aaKnown RBP3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 OR2B11Q5JQS5 317 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 C12orf73Q69YU5 71 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 TMUB2Q71RG4 321 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 LRRTM1Q86UE6 522 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 LHFPL3Q86UP9 236 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 ASB9Q96DX5 294 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 SPIN2AQ99865 258 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 SPIN2BQ9BPZ2 258 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 FGFR1OP2Q9NVK5 253 aa3.16□□□□□ -1.9
CTNNA1-218ENST00000519768 A0A1B0GU03 582 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 IGLC7A0M8Q6 106 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 E9PLD3 99 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 F5H768 121 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 K7EIM0 57 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 CCDC22O60826 627 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 PDCD6O75340 191 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 RPSAP08865 295 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 MGMTP16455 207 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 IGFBP3P17936 291 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 AZU1P20160 251 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 CDKN1BP46527 198 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 PSMD7P51665 324 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 CCL18P55774 89 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 SNRPGP62308 76 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 OXA1LQ15070 435 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 CDK10Q15131 360 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 VMA21Q3ZAQ7 101 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 YIF1BQ5BJH7 314 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 PUSL1Q8N0Z8 303 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 CBR4Q8N4T8 237 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 ZNF485Q8NCK3 441 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 OR10C1Q96KK4 312 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 OR2A7Q96R45 310 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 ZNF184Q99676 751 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 TMEM70Q9BUB7 260 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 OR2D2Q9H210 308 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 OR51E2Q9H255 320 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 VSIRQ9H7M9 311 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 ZNF446Q9NWS9 450 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 WARS2Q9UGM6 360 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 RABAC1Q9UI14 185 aa3.15□□□□□ -1.91
CTNNA1-218ENST00000519768 AK3Q9UIJ7 227 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms