RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 PYDC2Q56P42 97 aa18.44■□□□□ 0.54
VEGFA-220ENST00000519767 LGALS9CQ6DKI2 356 aa18.44■□□□□ 0.54
VEGFA-220ENST00000519767 NRN1Q9NPD7 142 aa18.44■□□□□ 0.54
VEGFA-220ENST00000519767 FBXL17Q9UF56 701 aa18.44■□□□□ 0.54
VEGFA-220ENST00000519767 FABP1P07148 127 aa18.43■□□□□ 0.54
VEGFA-220ENST00000519767 MIFP14174 115 aa18.43■□□□□ 0.54
VEGFA-220ENST00000519767 TCTAP57738 103 aa18.43■□□□□ 0.54
VEGFA-220ENST00000519767 PSMG4Q5JS54 123 aa18.43■□□□□ 0.54
VEGFA-220ENST00000519767 OR51G1Q8NGK1 321 aa18.43■□□□□ 0.54
VEGFA-220ENST00000519767 SLC25A21Q9BQT8 299 aaPredicted RBP18.43■□□□□ 0.54
VEGFA-220ENST00000519767 HRH4Q9H3N8 390 aa18.43■□□□□ 0.54
VEGFA-220ENST00000519767 DEFB4AO15263 64 aa18.42■□□□□ 0.54
VEGFA-220ENST00000519767 SIGLEC15Q6ZMC9 328 aa18.42■□□□□ 0.54
VEGFA-220ENST00000519767 C2CD4CQ8TF44 421 aa18.42■□□□□ 0.54
VEGFA-220ENST00000519767 FAM90A26D6RGX4 464 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 PITX3O75364 302 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 SLC25A6P12236 298 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 NUTF2P61970 127 aaKnown RBP18.41■□□□□ 0.54
VEGFA-220ENST00000519767 GAMTQ14353 236 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 OR8G2PQ6IF36 304 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 TMED4Q7Z7H5 227 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 LRTM2Q8N967 370 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 Q8NAQ8 132 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 RNF125Q96EQ8 232 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 SLC35E1Q96K37 410 aa18.41■□□□□ 0.54
VEGFA-220ENST00000519767 ZFP92A6NM28 416 aa18.4■□□□□ 0.54
VEGFA-220ENST00000519767 ZNF705EA8MWA4 302 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-220ENST00000519767 C11orf94C9JXX5 98 aa18.4■□□□□ 0.54
VEGFA-220ENST00000519767 S100A5P33763 92 aa18.4■□□□□ 0.54
VEGFA-220ENST00000519767 CENPSQ8N2Z9 138 aa18.4■□□□□ 0.54
VEGFA-220ENST00000519767 TRIM63Q969Q1 353 aa18.4■□□□□ 0.54
VEGFA-220ENST00000519767 C1QTNF4Q9BXJ3 329 aa18.4■□□□□ 0.54
VEGFA-220ENST00000519767 MED6O75586 246 aa18.39■□□□□ 0.53
VEGFA-220ENST00000519767 RAB11AP62491 216 aa18.39■□□□□ 0.53
VEGFA-220ENST00000519767 AGRNO00468 2067 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 IGHV4-28A0A0C4DH34 117 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 SNRPGP15A8MWD9 76 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 C4BPBP20851 252 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 C1orf194Q5T5A4 169 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 CSNK1G2-AS1Q8NCQ2 148 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 PBDC1Q9BVG4 233 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 TBC1D24Q9ULP9 559 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 TMED3Q9Y3Q3 217 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 V9GYH0 126 aa18.38■□□□□ 0.53
VEGFA-220ENST00000519767 RBMY1A1P0DJD3 496 aaKnown RBP18.37■□□□□ 0.53
VEGFA-220ENST00000519767 RBMY1CP0DJD4 496 aa18.37■□□□□ 0.53
VEGFA-220ENST00000519767 VAMP1P23763 118 aa18.37■□□□□ 0.53
VEGFA-220ENST00000519767 RPP30P78346 268 aaKnown RBP18.37■□□□□ 0.53
VEGFA-220ENST00000519767 RBMY1FQ15415 496 aaKnown RBP18.37■□□□□ 0.53
VEGFA-220ENST00000519767 CIB3Q96Q77 187 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-220ENST00000519767 X6R8D5 127 aa18.37■□□□□ 0.53
VEGFA-220ENST00000519767 H3BMM0 161 aa18.36■□□□□ 0.53
VEGFA-220ENST00000519767 NKX2-1P43699 371 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-220ENST00000519767 ZNF90Q03938 601 aa18.36■□□□□ 0.53
VEGFA-220ENST00000519767 IGKV1D-37A0A075B6S9 117 aa18.35■□□□□ 0.53
VEGFA-220ENST00000519767 CCDC160A6NGH7 325 aa18.35■□□□□ 0.53
VEGFA-220ENST00000519767 ID1P41134 155 aa18.35■□□□□ 0.53
VEGFA-220ENST00000519767 TRGV9Q99603 122 aa18.35■□□□□ 0.53
VEGFA-220ENST00000519767 CLEC5AQ9NY25 188 aa18.35■□□□□ 0.53
VEGFA-220ENST00000519767 SFT2D2O95562 160 aa18.34■□□□□ 0.53
VEGFA-220ENST00000519767 CFDP00746 253 aaPredicted RBP18.34■□□□□ 0.53
VEGFA-220ENST00000519767 ZNF79Q15937 498 aa18.34■□□□□ 0.53
VEGFA-220ENST00000519767 CCDC190Q86UF4 302 aa18.34■□□□□ 0.53
VEGFA-220ENST00000519767 RPP25LQ8N5L8 163 aaKnown RBP18.33■□□□□ 0.52
VEGFA-220ENST00000519767 SYNGR2O43760 224 aa18.32■□□□□ 0.52
VEGFA-220ENST00000519767 IAPPP10997 89 aa18.32■□□□□ 0.52
VEGFA-220ENST00000519767 HLA-DRB4P13762 266 aa18.32■□□□□ 0.52
VEGFA-220ENST00000519767 HLA-DMBP28068 263 aa18.32■□□□□ 0.52
VEGFA-220ENST00000519767 UBE2MP61081 183 aaKnown RBP18.32■□□□□ 0.52
VEGFA-220ENST00000519767 GGNBP1Q5YKI7 109 aa18.32■□□□□ 0.52
VEGFA-220ENST00000519767 PAIP2BQ9ULR5 123 aaKnown RBP18.32■□□□□ 0.52
VEGFA-220ENST00000519767 HLA-DRB4X5D2U9 266 aa18.32■□□□□ 0.52
VEGFA-220ENST00000519767 IGLL5B9A064 214 aa18.31■□□□□ 0.52
VEGFA-220ENST00000519767 LYZP61626 148 aa18.31■□□□□ 0.52
VEGFA-220ENST00000519767 PPP1R1AQ13522 171 aa18.31■□□□□ 0.52
VEGFA-220ENST00000519767 SPANXN2Q5MJ10 180 aa18.31■□□□□ 0.52
VEGFA-220ENST00000519767 THAP8Q8NA92 274 aa18.31■□□□□ 0.52
VEGFA-220ENST00000519767 XCL2Q9UBD3 114 aa18.31■□□□□ 0.52
VEGFA-220ENST00000519767 ELOA3CA0A087WX78 387 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-220ENST00000519767 TRAV10A0A0B4J240 114 aa18.3■□□□□ 0.52
VEGFA-220ENST00000519767 PSMB3P49720 205 aa18.3■□□□□ 0.52
VEGFA-220ENST00000519767 SAMD13Q5VXD3 122 aa18.3■□□□□ 0.52
VEGFA-220ENST00000519767 SPATA31B1PQ5VZV4 182 aa18.3■□□□□ 0.52
VEGFA-220ENST00000519767 PPP1R14BQ96C90 147 aa18.3■□□□□ 0.52
VEGFA-220ENST00000519767 APLNQ9ULZ1 77 aa18.3■□□□□ 0.52
VEGFA-220ENST00000519767 ZNF701M0R085 212 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-220ENST00000519767 HOXB5P09067 269 aa18.29■□□□□ 0.52
VEGFA-220ENST00000519767 OR2F1Q13607 317 aa18.29■□□□□ 0.52
VEGFA-220ENST00000519767 OR8I2Q8N0Y5 310 aa18.29■□□□□ 0.52
VEGFA-220ENST00000519767 LINC00052Q96N35 136 aa18.29■□□□□ 0.52
VEGFA-220ENST00000519767 CLUHP3Q96NS8 147 aa18.29■□□□□ 0.52
VEGFA-220ENST00000519767 WRBO00258 174 aa18.28■□□□□ 0.52
VEGFA-220ENST00000519767 DEDDO75618 318 aa18.28■□□□□ 0.52
VEGFA-220ENST00000519767 S100A7P31151 101 aa18.28■□□□□ 0.52
VEGFA-220ENST00000519767 FOXI2Q6ZQN5 318 aa18.28■□□□□ 0.52
VEGFA-220ENST00000519767 WDR12Q9GZL7 423 aaKnown RBP18.28■□□□□ 0.52
VEGFA-220ENST00000519767 MAGT1Q9H0U3 335 aa18.28■□□□□ 0.52
VEGFA-220ENST00000519767 SAV1Q9H4B6 383 aaPredicted RBP18.28■□□□□ 0.52
VEGFA-220ENST00000519767 SLC45A2Q9UMX9 530 aa18.28■□□□□ 0.52
VEGFA-220ENST00000519767 IGKV1OR2-108A0A075B7D4 117 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms