RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SCGB3A2Q96PL1 93 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 BCL7BQ9BQE9 202 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 SLIRPQ9GZT3 109 aaKnown RBP9□□□□□ -0.97
CSMD1-205ENST00000519623 RBKSQ9H477 322 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 SEPSECSQ9HD40 501 aaKnown RBP9□□□□□ -0.97
CSMD1-205ENST00000519623 CLEC5AQ9NY25 188 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 RSL24D1Q9UHA3 163 aaKnown RBP9□□□□□ -0.97
CSMD1-205ENST00000519623 SHPKQ9UHJ6 478 aa9□□□□□ -0.97
CSMD1-205ENST00000519623 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 FAM90A26D6RGX4 464 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 HLA-DMBP28068 263 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 KLF9Q13886 244 aaPredicted RBP8.99□□□□□ -0.97
CSMD1-205ENST00000519623 SMCO1Q147U7 214 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 LGI3Q8N145 548 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 OR51G1Q8NGK1 321 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 DTD1Q8TEA8 209 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 NRN1Q9NPD7 142 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 MCUBQ9NWR8 336 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 TBC1D24Q9ULP9 559 aa8.99□□□□□ -0.97
CSMD1-205ENST00000519623 IGKV1D-37A0A075B6S9 117 aa8.98□□□□□ -0.97
CSMD1-205ENST00000519623 FABP12A6NFH5 140 aa8.98□□□□□ -0.97
CSMD1-205ENST00000519623 IGLL5B9A064 214 aa8.98□□□□□ -0.97
CSMD1-205ENST00000519623 H3BMM0 161 aa8.98□□□□□ -0.97
CSMD1-205ENST00000519623 GPX4P36969 197 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-205ENST00000519623 ATP5IP56385 69 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-205ENST00000519623 GAMTQ14353 236 aa8.98□□□□□ -0.97
CSMD1-205ENST00000519623 SIGLEC15Q6ZMC9 328 aa8.98□□□□□ -0.97
CSMD1-205ENST00000519623 H3BMQ9 156 aa8.97□□□□□ -0.97
CSMD1-205ENST00000519623 PITX3O75364 302 aa8.97□□□□□ -0.97
CSMD1-205ENST00000519623 SNRPD3P62318 126 aaKnown RBP8.97□□□□□ -0.97
CSMD1-205ENST00000519623 ZNF90Q03938 601 aa8.97□□□□□ -0.97
CSMD1-205ENST00000519623 Q6ZTC4 211 aa8.97□□□□□ -0.97
CSMD1-205ENST00000519623 RNF125Q96EQ8 232 aa8.97□□□□□ -0.97
CSMD1-205ENST00000519623 ANXA3P12429 323 aa8.96□□□□□ -0.98
CSMD1-205ENST00000519623 SRPXP78539 464 aa8.96□□□□□ -0.98
CSMD1-205ENST00000519623 C12orf74Q32Q52 190 aa8.96□□□□□ -0.98
CSMD1-205ENST00000519623 OR1S1Q8NH92 325 aa8.96□□□□□ -0.98
CSMD1-205ENST00000519623 WDR12Q9GZL7 423 aaKnown RBP8.96□□□□□ -0.98
CSMD1-205ENST00000519623 XCL2Q9UBD3 114 aa8.96□□□□□ -0.98
CSMD1-205ENST00000519623 TRAV10A0A0B4J240 114 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 ZFP92A6NM28 416 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 NKX2-1P43699 371 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-205ENST00000519623 DEFB1P60022 68 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 NUTF2P61970 127 aaKnown RBP8.95□□□□□ -0.98
CSMD1-205ENST00000519623 TMEM128Q5BJH2 165 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 GDF5OSQ5U4N7 250 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 OR8G2PQ6IF36 304 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 MCFD2Q8NI22 146 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 TRIM63Q969Q1 353 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 PBDC1Q9BVG4 233 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 C1QTNF4Q9BXJ3 329 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 CELA1Q9UNI1 258 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
CSMD1-205ENST00000519623 IGKV1OR2-108A0A075B7D4 117 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 SLC25A6P12236 298 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 C1orf194Q5T5A4 169 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 ZNF705AQ6ZN79 300 aaPredicted RBP8.94□□□□□ -0.98
CSMD1-205ENST00000519623 LRTM2Q8N967 370 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 SLC35E1Q96K37 410 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 PFDN2Q9UHV9 154 aa8.94□□□□□ -0.98
CSMD1-205ENST00000519623 IGHV4-4A0A075B6R2 117 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 SNRPGP15A8MWD9 76 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 SOCS3O14543 225 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 FAUP35544 74 aaKnown RBP8.93□□□□□ -0.98
CSMD1-205ENST00000519623 NUP62P37198 522 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-205ENST00000519623 OR2F1Q13607 317 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 PYDC2Q56P42 97 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 GSG1LQ6UXU4 331 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 TMED4Q7Z7H5 227 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 TOMM5Q8N4H5 51 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 CLUHP3Q96NS8 147 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 NEU1Q99519 415 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 TRGV9Q99603 122 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 RNF126Q9BV68 326 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
CSMD1-205ENST00000519623 V9GYH0 126 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
CSMD1-205ENST00000519623 ZNF705FA8MVS1 300 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-205ENST00000519623 PRSS46E5RG02 174 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 FABP1P07148 127 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 ZNF705DP0CH99 300 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-205ENST00000519623 ZNF705BP0CI00 300 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-205ENST00000519623 IAPPP10997 89 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 ID1P41134 155 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 AP3S2P59780 193 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 LYZP61626 148 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 RAB11AP62491 216 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 ZNF79Q15937 498 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 FOXI2Q6ZQN5 318 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 CENPSQ8N2Z9 138 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 THAP8Q8NA92 274 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 C17orf77Q96MU5 243 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 LINC00052Q96N35 136 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 SLC25A21Q9BQT8 299 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-205ENST00000519623 SCRT1Q9BWW7 348 aa8.92□□□□□ -0.98
CSMD1-205ENST00000519623 DEFB131BA0A096LNP1 70 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms