RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 J3QLI3 93 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CHEK1O14757 476 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 LMX1BO60663 402 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGHG1P01857 330 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGHMP01871 453 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 ELANEP08246 267 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 LGALS1P09382 135 aaKnown RBP3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CRYGAP11844 174 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CCL1P22362 96 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CTGFP29279 349 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 HERVK_113P63121 156 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 KISS1Q15726 138 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 SPANXN5Q5MJ07 72 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CIARTQ8N365 385 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 GATD1Q8NB37 220 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 MAFAQ8NHW3 353 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 SCAMP5Q8TAC9 235 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 MYOZ3Q8TDC0 251 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 IL1F10Q8WWZ1 152 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TMEM158Q8WZ71 300 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 OVCA2Q8WZ82 227 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 RND1Q92730 232 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 C1orf147Q96MC9 270 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 LINC01600Q96MT4 127 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CHAC1Q9BUX1 264 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 C1QTNF5Q9BXJ0 243 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 NPCDR1Q9BY65 106 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TECRQ9NZ01 308 aaKnown RBP3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 DOCK3Q8IZD9 2030 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 TDRD6O60522 2096 aaKnown RBP3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 OBSL1O75147 1896 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 CPAMD8Q8IZJ3 1885 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 MED12LQ86YW9 2145 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGLV1-36A0A0B4J1U3 117 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 MYMXA0A1B0GTQ4 84 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 FRG2CA6NGY1 282 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 K7EN84 100 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 NPYP01303 97 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 P04436 131 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 FCGR2AP12318 317 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 GCHFRP30047 84 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 RPL13AP40429 203 aaKnown RBP3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 RPL18Q07020 188 aaKnown RBP3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 C3AR1Q16581 482 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF718Q3SXZ3 478 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 SPRNQ5BIV9 151 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 CENPWQ5EE01 88 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM120AOSQ5T036 256 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 ASCL5Q7RTU5 278 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 DTX2Q86UW9 622 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 APRG1Q8IVJ8 170 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 WDR31Q8NA23 367 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 PRSS3P2Q8NHM4 247 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZPLD1Q8TCW7 415 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF414Q96IQ9 312 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 BMFQ96LC9 184 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 NAA38Q9BRA0 125 aaKnown RBP3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 MCRIP2Q9BUT9 160 aaKnown RBP3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 C1orf43Q9BWL3 253 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 C21orf62Q9NYP8 219 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF256Q9Y2P7 627 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 LHFPL6Q9Y693 200 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 NLRC5Q86WI3 1866 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 PLXNA4Q9HCM2 1894 aa3.88□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRBV20OR9-2A0A075B6H5 130 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 A0A1W2PPC4 97 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 MBD3L4A6NDZ8 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 MBD3L3A6NE82 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 MBD3L5A6NJ08 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 H3BSH0 61 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 PGLYRP1O75594 196 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGKV1D-33P01593 117 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGKV1-33P01594 117 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 MYF5P13349 255 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 HLA-DMBP28068 263 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 CXCL5P42830 114 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 NMUP48645 174 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 INSL3P51460 131 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 PPP1CAP62136 330 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 PRDX1Q06830 199 aaKnown RBP3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 GTF3C1Q12789 2109 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 KLRB1Q12918 225 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 TWIST1Q15672 202 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 KIAA2026Q5HYC2 2103 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 GOLT1AQ6ZVE7 132 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 AMN1Q8IY45 258 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 OR5AS1Q8N127 324 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 ANKRD29Q8N6D5 301 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 GJC3Q8NFK1 279 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 GATAD1Q8WUU5 269 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 BAALCQ8WXS3 180 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 IFI27L1Q96BM0 104 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 BBC3Q96PG8 261 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 HIST1H4GQ99525 98 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 PRRG4Q9BZD6 226 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 ALKBH4Q9NXW9 302 aa3.87□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM30AQ9NZY2 134 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms