RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 GLI2P10070 1586 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 SRP14P37108 136 aaKnown RBP3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 YPEL3P61236 119 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 UBE2BP63146 152 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 EIF5AP63241 154 aaKnown RBP3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 FOXF1Q12946 379 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF141Q15928 474 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 BCL2L15Q5TBC7 163 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 MIR17HGQ75NE6 70 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 LYPD6Q86Y78 171 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 HIST3H2BBQ8N257 126 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 FGF13Q92913 245 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF285Q96NJ3 590 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 IMMP2LQ96T52 175 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 C2orf88Q9BSF0 95 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 MRPL32Q9BYC8 188 aaKnown RBP3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 TRPM3Q9HCF6 1732 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 OSTCQ9NRP0 149 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 NAT8Q9UHE5 227 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 TRAPPC8Q9Y2L5 1435 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 DOCK9Q9BZ29 2069 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF518AQ6AHZ1 1483 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 TEX14Q8IWB6 1497 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 ADGBQ8N7X0 1667 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 DUOX2Q9NRD8 1548 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 ARHGEF12Q9NZN5 1544 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 CFAP74Q9C0B2 1584 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 MAST1Q9Y2H9 1570 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 DENND4CQ5VZ89 1909 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 ERBINQ96RT1 1412 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 A0A096LPI6 279 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 IRGMA1A4Y4 181 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 LYZL6O75951 148 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 LGALS3P17931 250 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 ZNF117Q03924 483 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 NDUFA5Q16718 116 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 VMA21Q3ZAQ7 101 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 TRAPPC6BQ86SZ2 158 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 LRRC28Q86X40 367 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 TCTE3Q8IZS6 198 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 ASF1BQ9NVP2 202 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 ATRXP46100 2492 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 PCM1Q15154 2024 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 CROCC2H7BZ55 1655 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 GCC2Q8IWJ2 1684 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 COL27A1Q8IZC6 1860 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 ABCC1P33527 1531 aa3.39□□□□□ -1.87
CTNNA1-202ENST00000517533 MYH10P35580 1976 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 TUBGCP6Q96RT7 1819 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 MEIKINA0A087WXM9 373 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 TRAV5A0A0B4J249 113 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 LOC107984640A0A0U1RRK4 108 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 GGTLC3B5MD39 225 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 DLEU1O43261 78 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 NAPSAO96009 420 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 MT-ND4LP03901 98 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 DEFA4P12838 97 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 DYNLT3P51808 116 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 TMBIM6P55061 237 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 ARPP19P56211 112 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 SUPT4H1P63272 117 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 MLH3Q9UHC1 1453 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 PLXNC1O60486 1568 aa3.38□□□□□ -1.87
CTNNA1-202ENST00000517533 SCN4AP35499 1836 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 A0A0J9YW62 118 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 A0A1B0GU33 70 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 MIF4GDA9UHW6 222 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 LY6LH3BQJ8 138 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 K7ERJ3 54 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 GGCTO75223 188 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 DPM2O94777 84 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 P0DMU3 169 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 FAM231AP0DMU4 169 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 FAM231CP0DMU5 169 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 GZMBP10144 247 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 KDELR1P24390 212 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 EIF2B2P49770 351 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 TMEM136Q6ZRR5 245 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 C10orf126Q8N4M7 172 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 SIGLECL1Q8N7X8 197 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 SCGB3A1Q96QR1 104 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 HIST1H2BLQ99880 126 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 LPAR5Q9H1C0 372 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 MRPL16Q9NX20 251 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 ATP7AQ04656 1500 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 ECM29Q5VYK3 1845 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 KDM6BO15054 1643 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 LTBP4Q8N2S1 1624 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 MAP3K4Q9Y6R4 1608 aa3.37□□□□□ -1.87
CTNNA1-202ENST00000517533 DOCK4Q8N1I0 1966 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 A2MP01023 1474 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 PZPP20742 1482 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 PLA2R1Q13018 1463 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 MAGI2Q86UL8 1455 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 IGLV3-12A0A075B6K2 115 aa3.36□□□□□ -1.87
CTNNA1-202ENST00000517533 CST7O76096 145 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms