RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PDE6HQ13956 83 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 FP248Q71RG6 208 aaPredicted RBP1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 OR10J5Q8NHC4 309 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 Q96M85 177 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 TRABDQ9H4I3 376 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 MED29Q9NX70 200 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 LAMTOR3Q9UHA4 124 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 SCN10AQ9Y5Y9 1956 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 PCNX2A6NKB5 2137 aa1.3□□□□□ -2.2
RNU6-840P-201ENST00000517275 KIF1BO60333 1816 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 ZFHX2Q9C0A1 2572 aaPredicted RBP1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 IGKV1D-42A0A075B6H8 117 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 MRPS14O60783 128 aaKnown RBP1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 APOA2P02652 100 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 DR1Q01658 176 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 LINC00471Q8N535 108 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 GPER1Q99527 375 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 SELENOSQ9BQE4 189 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 PRADC1Q9BSG0 188 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 SS18L2Q9UHA2 77 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 SLC35A3Q9Y2D2 325 aa1.29□□□□□ -2.2
RNU6-840P-201ENST00000517275 TRAV5A0A0B4J249 113 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 A8MWV9 139 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 C1orf196B1AJZ1 125 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 GPR31O00270 319 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 HLA-EP13747 358 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 OGNP20774 298 aaKnown RBP1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 DYNLT1P63172 113 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 BCL2L15Q5TBC7 163 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 PHF5AQ7RTV0 110 aaKnown RBP1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 PDZD9Q8IXQ8 264 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 OR2T10Q8NGZ9 312 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 GPX7Q96SL4 187 aaPredicted RBP1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 LINC00467Q9BRT7 94 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 PBDC1Q9BVG4 233 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 MRPL32Q9BYC8 188 aaKnown RBP1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 UHRF1BP1Q6BDS2 1440 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 COL5A3P25940 1745 aaPredicted RBP1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 STRCQ7RTU9 1775 aa1.28□□□□□ -2.2
RNU6-840P-201ENST00000517275 PLXND1Q9Y4D7 1925 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 GBF1Q92538 1859 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 ARHGEF28Q8N1W1 1705 aaKnown RBP1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 SYNMO15061 1565 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 TRGV2A0A075B6R0 118 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 A0A1B0GV72 72 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 LYZL6O75951 148 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 UBL3O95164 117 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 CSN2P05814 226 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 UBBP0CG47 229 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 NFYBP25208 207 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 UBE2BP63146 152 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 ESRGQ1W209 222 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 BRMS1LQ5PSV4 323 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 RPS19BP1Q86WX3 136 aaKnown RBP1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 TEX47Q8TBZ9 253 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 SLC50A1Q9BRV3 221 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 OR2J1Q9GZK6 312 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 BCL2L10Q9HD36 194 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 MED9Q9NWA0 146 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 PCTPQ9UKL6 214 aa1.27□□□□□ -2.21
RNU6-840P-201ENST00000517275 GLI3P10071 1580 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 RGS12O14924 1447 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 SETD5Q9C0A6 1442 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 TRAV12-1A0A0B4J245 112 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 TRBV6-5A0A0K0K1A5 114 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 A0A1W2PRE2 83 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 MAP1LC3B2A6NCE7 125 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 TLCD2A6NGC4 264 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 OR1I1O60431 355 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 IFNA14P01570 189 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 CRPP02741 224 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 TRGC2P03986 189 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 RNASE3P12724 160 aaKnown RBP1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 GLRXP35754 106 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 DYNLT3P51808 116 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 RHOGP84095 191 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 LTC4SQ16873 150 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 C1orf140Q5VVS0 124 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 DCUN1D2Q6PH85 259 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 TOMM20LQ6UXN7 152 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 Q8IYB0 196 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 LINC00311Q8N616 119 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 C12orf29Q8N999 325 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 ZNF563Q8TA94 476 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 MAP1LC3BQ9GZQ8 125 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 POPDC3Q9HBV1 291 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 C14orf132Q9NPU4 83 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 NUBP2Q9Y5Y2 271 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 SBF1O95248 1867 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 RIMBP3CA6NJZ7 1639 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 RIMBP3BA6NNM3 1639 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 RIMBP3Q9UFD9 1639 aa1.26□□□□□ -2.21
RNU6-840P-201ENST00000517275 C2orf70A6NJV1 201 aa1.25□□□□□ -2.21
RNU6-840P-201ENST00000517275 TMEM256-PLSCR3K7ERE1 68 aa1.25□□□□□ -2.21
RNU6-840P-201ENST00000517275 NDUFB3O43676 98 aa1.25□□□□□ -2.21
RNU6-840P-201ENST00000517275 PROSCO94903 275 aa1.25□□□□□ -2.21
RNU6-840P-201ENST00000517275 IFNA21P01568 189 aa1.25□□□□□ -2.21
RNU6-840P-201ENST00000517275 CRHP06850 196 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms