RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 BOD1L2Q8IYS8 172 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 SLC37A2Q8TED4 501 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 RBP7Q96R05 134 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 CCL13Q99616 98 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 CD300AQ9UGN4 299 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 KIF1AQ12756 1690 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 A0A1W2PP64 1363 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 TRPM1Q7Z4N2 1603 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 ECM29Q5VYK3 1845 aa0.15□□□□□ -2.38
SCARNA1-201ENST00000517138 DENND4CQ5VZ89 1909 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 NCOA3Q9Y6Q9 1424 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 IRGMA1A4Y4 181 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 C19orf84I3L1E1 186 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 ITGB1BP1O14713 200 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 PIN1P1O15428 100 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 CLDN12P56749 244 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 RPS24P62847 133 aaKnown RBP0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 C17orf78Q8N4C9 275 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 ZNF676Q8N7Q3 588 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 OR5B17Q8NGF7 314 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 AQP3Q92482 292 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 GNPNAT1Q96EK6 184 aaPredicted RBP0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 MRPL57Q9BQC6 102 aaKnown RBP0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 OR8D2Q9GZM6 311 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 HRASLSQ9HDD0 168 aa0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 INO80Q9ULG1 1556 aaPredicted RBP0.15□□□□□ -2.39
SCARNA1-201ENST00000517138 ABCC6O95255 1503 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 ARHGAP5Q13017 1502 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 NALCNQ8IZF0 1738 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 TRBV6-7A0A0A0MS04 114 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 SMLR1H3BR10 107 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 SDCBPO00560 298 aaPredicted RBP0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 ATP6V1G2O95670 118 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 KRTAP20-2Q3LI61 65 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 DNAL1Q4LDG9 190 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 Q5VSD8 79 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 C12orf29Q8N999 325 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 OR5AK3PQ8NH89 298 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 SGMS2Q8NHU3 365 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 SPRR2FQ96RM1 72 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 SERPINI1Q99574 410 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 ARHGEF10O15013 1369 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 KIF15Q9NS87 1388 aa0.14□□□□□ -2.39
SCARNA1-201ENST00000517138 TROQ12816 1431 aaPredicted RBP0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 TRPM2O94759 1503 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 PATJQ8NI35 1801 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 ATG2AQ2TAZ0 1938 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 TRAV14DV4A0A0A6YYC5 116 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 TRBV10-2A0A0K0K1G8 114 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 LEPROTO15243 131 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 IL6P05231 212 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 RUNX1Q01196 453 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 ZNF345Q14585 488 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 ZNF846Q147U1 533 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 Q8N6K4 173 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 ASB13Q8WXK3 278 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 TIPINQ9BVW5 301 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 UPF3BQ9BZI7 483 aaKnown RBP0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 C1orf109Q9NX04 203 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 BAIAP2Q9UQB8 552 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 PRELID1Q9Y255 219 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 TP53TG1Q9Y2A0 90 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 COQ4Q9Y3A0 265 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 MRC1P22897 1456 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 NFAT5O94916 1531 aa0.13□□□□□ -2.39
SCARNA1-201ENST00000517138 SIPA1L3O60292 1781 aaPredicted RBP0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 FAM208AQ9UK61 1670 aaKnown RBP0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 NEO1Q92859 1461 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 C5orf49A4QMS7 147 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 MKRN2OSH3BPM6 223 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 APOMO95445 188 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 MSMBP08118 114 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 SLAMF1Q13291 335 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 CDK10Q15131 360 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 C10orf67Q8IYJ2 551 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 TET1Q8NFU7 2136 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 ZFP30Q9Y2G7 519 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 BTAF1O14981 1849 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 FER1L6Q2WGJ9 1857 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 SYNRGQ9UMZ2 1314 aa0.12□□□□□ -2.39
SCARNA1-201ENST00000517138 POLA1P09884 1462 aaPredicted RBP0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 NCOA2Q15596 1464 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 TAF1LQ8IZX4 1826 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 PMP2P02689 132 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 PRH1P02810 166 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 HLA-DMBP28068 263 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 SSX8Q7RTT4 187 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 OR5L1Q8NGL2 311 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 ANKRD36BP1Q96IX9 119 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 BBS2Q9BXC9 721 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 CXorf21Q9HAI6 301 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 MCM3APO60318 1980 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 AKAP12Q02952 1782 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 TECPR2O15040 1411 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 CNTLNQ9NXG0 1405 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 KIAA1107Q9UPP5 1409 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 CFAP74Q9C0B2 1584 aa0.11□□□□□ -2.39
SCARNA1-201ENST00000517138 ZNF518AQ6AHZ1 1483 aa0.1□□□□□ -2.39
SCARNA1-201ENST00000517138 FREM3P0C091 2139 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms