RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 TPTE2P1Q5T6R2 138 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 FBLN5Q9UBX5 448 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 FAM90A9PA6NNJ1 464 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 ADARB2-AS1A8MUL3 147 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 M0R1W7 72 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 PSCAO43653 123 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 RPL23P62829 140 aaKnown RBP13.24□□□□□ -0.29
TRIM41-207ENST00000515223 PSG8Q9UQ74 426 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 DPRXA6NFQ7 191 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 FREM3P0C091 2139 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 BRD3OSQ6XYD6 125 aa13.24□□□□□ -0.29
TRIM41-207ENST00000515223 TTC32Q5I0X7 151 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 DMRTA1Q5VZB9 504 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 CYSLTR1Q9Y271 337 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 TFF1P04155 84 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 FAM89BQ8N5H3 189 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 SPTAN1Q13813 2472 aaKnown RBP13.23□□□□□ -0.29
TRIM41-207ENST00000515223 TRAV9-1A0A075B6T8 112 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 SEPSECSQ9HD40 501 aaKnown RBP13.23□□□□□ -0.29
TRIM41-207ENST00000515223 DOCK6Q96HP0 2047 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 GGNQ86UU5 652 aa13.23□□□□□ -0.29
TRIM41-207ENST00000515223 C5orf63A6NC05 138 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 IZUMO1RA6ND01 250 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 TMEM86BQ8N661 226 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 RALGAPA1Q6GYQ0 2036 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 MBD3L4A6NDZ8 208 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 MBD3L3A6NE82 208 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 MBD3L5A6NJ08 208 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 HIGD1CA8MV81 97 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 KLHL30-AS1Q8NEE0 82 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 MBD3L2Q8NHZ7 208 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 NDUFS8O00217 210 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 LHFPL1Q86WI0 220 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 C17orf82Q86X59 251 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 HIST3H2BBQ8N257 126 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
TRIM41-207ENST00000515223 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 PPBPP02775 128 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 HIST1H2BLQ99880 126 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 CRIM1Q9NZV1 1036 aa13.22□□□□□ -0.29
TRIM41-207ENST00000515223 DIDO1Q9BTC0 2240 aaKnown RBP13.21□□□□□ -0.29
TRIM41-207ENST00000515223 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 CD55P08174 381 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 MBNL3Q9NUK0 354 aaKnown RBP13.21□□□□□ -0.29
TRIM41-207ENST00000515223 CADP27708 2225 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 TSPAN13O95857 204 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 SRSF1Q07955 248 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM41-207ENST00000515223 KLRD1Q13241 179 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 IGHV1-3A0A0C4DH29 117 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 CD28P10747 220 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 GNG5P63218 68 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 C5orf24Q7Z6I8 188 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 MDS2Q8NDY4 140 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
TRIM41-207ENST00000515223 TBL2Q9Y4P3 447 aaKnown RBP13.21□□□□□ -0.29
TRIM41-207ENST00000515223 LCNL1Q6ZST4 164 aa13.21□□□□□ -0.3
TRIM41-207ENST00000515223 RNF182Q8N6D2 247 aa13.21□□□□□ -0.3
TRIM41-207ENST00000515223 BEND2Q8NDZ0 799 aa13.21□□□□□ -0.3
TRIM41-207ENST00000515223 FGFBP3Q8TAT2 258 aa13.21□□□□□ -0.3
TRIM41-207ENST00000515223 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.3
TRIM41-207ENST00000515223 C9JQL5 133 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 J3QKU1 62 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 NDUFA3O95167 84 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 CRYGSP22914 178 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 RAMP3O60896 148 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 F2Z2F3 143 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 MLNRO43193 412 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 ORMDL2Q53FV1 153 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 ASCL4Q6XD76 172 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 TMEM190Q8WZ59 177 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 C14orf144Q96I85 54 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 RCHY1Q96PM5 261 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 NLRC5Q86WI3 1866 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 CLPSP04118 112 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 GATA3P23771 443 aa13.2□□□□□ -0.3
TRIM41-207ENST00000515223 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
TRIM41-207ENST00000515223 TRBV7-1A0A0A6YYK4 115 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 PGPEP1LA6NFU8 196 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 C1QTNF9P0C862 333 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 STAG3L3P0CL85 134 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 RPL35AP18077 110 aaKnown RBP13.19□□□□□ -0.3
TRIM41-207ENST00000515223 RPL36AP83881 106 aaKnown RBP13.19□□□□□ -0.3
TRIM41-207ENST00000515223 RPL36ALQ969Q0 106 aaKnown RBP13.19□□□□□ -0.3
TRIM41-207ENST00000515223 NDUFAF3Q9BU61 184 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 ZNF581Q9P0T4 197 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 MST1LQ2TV78 715 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 PYY3Q5JQD4 70 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 NBASA2RRP1 2371 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 K7ENP7 123 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 WFDC12Q8WWY7 111 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 EFNA2O43921 213 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 APOMO95445 188 aa13.19□□□□□ -0.3
TRIM41-207ENST00000515223 PYYP10082 97 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 ADMP35318 185 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms