RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 SLC25A20O43772 301 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 NCR2O95944 276 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 TDGF1P13385 188 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 SPATA31B1PQ5VZV4 182 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 CENPVQ7Z7K6 275 aaPredicted RBP11.02□□□□□ -0.64
TCOF1-214ENST00000515035 NCOR1O75376 2440 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 ATRXP46100 2492 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 IGHV3-64A0A075B6Q5 118 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 F2Z2F3 143 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 SPINK8P0C7L1 97 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 CCL3L1P16619 93 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 DPH3Q96FX2 82 aa11.02□□□□□ -0.64
TCOF1-214ENST00000515035 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 WNK2Q9Y3S1 2297 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 CACNA1EQ15878 2313 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 CD28P10747 220 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 KLF17Q5JT82 389 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-214ENST00000515035 BMPERQ8N8U9 685 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 PIMREGQ9BSJ6 248 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 MRPL27Q9P0M9 148 aaKnown RBP11.02□□□□□ -0.65
TCOF1-214ENST00000515035 CADP27708 2225 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 IGHV2OR16-5A0A0B4J2B6 119 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 TMEM238C9JI98 176 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 LAGE3Q14657 143 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 GLMPQ8WWB7 406 aa11.02□□□□□ -0.65
TCOF1-214ENST00000515035 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-214ENST00000515035 FREM3P0C091 2139 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 ITLN2Q8WWU7 325 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-214ENST00000515035 LSM4Q9Y4Z0 139 aaKnown RBP11.01□□□□□ -0.65
TCOF1-214ENST00000515035 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 FOXH1O75593 365 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 ANKRD36A6QL64 1941 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 TMEM249Q2WGJ8 235 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 NMSQ5H8A3 153 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 SIGLEC12Q96PQ1 595 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 SNHG12Q9BXW3 62 aa11.01□□□□□ -0.65
TCOF1-214ENST00000515035 IGKV1-12A0A0C4DH73 117 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 IGKV1D-12P01611 117 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 CELA3BP08861 270 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 ADAMTSL5Q6ZMM2 481 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 RTN4RL2Q86UN3 420 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 LINC01587Q99440 93 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 PSG3Q16557 428 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 TNFRSF6BO95407 300 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 APOBEC3AP31941 199 aaPredicted RBP11□□□□□ -0.65
TCOF1-214ENST00000515035 ATP5J2P56134 94 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 ABHD17AQ96GS6 310 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 POLR3KQ9Y2Y1 108 aaPredicted RBP11□□□□□ -0.65
TCOF1-214ENST00000515035 LINC01549A6NIU2 74 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 NBR2O15453 112 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 FXYD7P58549 80 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 HIST1H4AP62805 103 aaKnown RBP11□□□□□ -0.65
TCOF1-214ENST00000515035 C2orf82Q6UX34 121 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 C1orf122Q6ZSJ8 110 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 NUP35Q8NFH5 326 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 C8orf46Q8TAG6 207 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 C20orf144Q9BQM9 153 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 CST9LQ9H4G1 147 aa11□□□□□ -0.65
TCOF1-214ENST00000515035 FAM27E3Q08E93 113 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 C1orf162Q8NEQ5 155 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-214ENST00000515035 PDLIM4P50479 330 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 TMEM42Q69YG0 159 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 LY96Q9Y6Y9 160 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 HAX1O00165 279 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 IGHV3-11P01762 117 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 TFF1P04155 84 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 PRB4P10163 310 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-214ENST00000515035 ZC2HC1BQ5TFG8 222 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 MYOFQ9NZM1 2061 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 NOTCH3Q9UM47 2321 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 TRGV2A0A075B6R0 118 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 FAM90A2PQ658T7 463 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
TCOF1-214ENST00000515035 MGST2Q99735 147 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 ROS1P08922 2347 aa10.99□□□□□ -0.65
TCOF1-214ENST00000515035 MED12Q93074 2177 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 IGHV1-2P23083 117 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 MORN3Q6PF18 240 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-214ENST00000515035 IMMP1LQ96LU5 166 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
TCOF1-214ENST00000515035 A0A0G2JMZ2 1700 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 LRRC37A2A6NM11 1700 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 ZNF138P52744 262 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 LYZL1Q6UWQ5 148 aa10.98□□□□□ -0.65
TCOF1-214ENST00000515035 TP53BP1Q12888 1972 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-214ENST00000515035 LHFPL4Q7Z7J7 247 aa10.97□□□□□ -0.65
TCOF1-214ENST00000515035 FAM57AQ8TBR7 257 aa10.97□□□□□ -0.65
TCOF1-214ENST00000515035 EDA2RQ9HAV5 297 aa10.97□□□□□ -0.65
TCOF1-214ENST00000515035 PMS2P5A8MQ11 134 aa10.97□□□□□ -0.65
TCOF1-214ENST00000515035 C9JQL5 133 aa10.97□□□□□ -0.65
TCOF1-214ENST00000515035 IGHV2-70P01814 119 aa10.97□□□□□ -0.65
TCOF1-214ENST00000515035 TCRAP04437 139 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms