RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 ADAP1O75689 374 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 HOXB5P09067 269 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 NQO2P16083 231 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 HLA-GP17693 338 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 IZUMO4Q1ZYL8 232 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 GGNBP1Q5YKI7 109 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-215ENST00000514660 CADM3Q8N126 398 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 SLC35G3Q8N808 338 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 ZNRF2Q8NHG8 242 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 COQ8AQ8NI60 647 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 TMEM167AQ8TBQ9 72 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 CXorf58Q96LI9 332 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 COMMD9Q9P000 198 aa7.43□□□□□ -1.22
NEDD9-215ENST00000514660 IGHV7-4-1A0A0J9YVY3 117 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 NDUFA4O00483 81 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 KBTBD11O94819 623 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 SIX6O95475 246 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 HRASP01112 189 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 APOHP02749 345 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-215ENST00000514660 HIST1H1BP16401 226 aaKnown RBP7.42□□□□□ -1.22
NEDD9-215ENST00000514660 SRPXP78539 464 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 FCN2Q15485 313 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 NMSQ5H8A3 153 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 LSM10Q969L4 123 aaKnown RBP7.42□□□□□ -1.22
NEDD9-215ENST00000514660 OR10C1Q96KK4 312 aa7.42□□□□□ -1.22
NEDD9-215ENST00000514660 hCG_2014768A0A024R1R8 64 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 DUXBA0A1W2PPF3 345 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 MARCH11A6NNE9 402 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 UPK2O00526 184 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 CCSO14618 274 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 SSNA1O43805 119 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-215ENST00000514660 SULT1A3P0DMM9 295 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 SULT1A4P0DMN0 295 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 CXCL3P19876 107 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 CMC4P56277 68 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-215ENST00000514660 RRAS2P62070 204 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-215ENST00000514660 IL15RAQ13261 267 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 H2BFWTQ7Z2G1 175 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 DMBX1Q8NFW5 382 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 OR11H7Q8NGC8 314 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 CHAC2Q8WUX2 184 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 OR2A7Q96R45 310 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 AIFM2Q9BRQ8 373 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 MED28Q9H204 178 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 TMEM140Q9NV12 185 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 BET1LQ9NYM9 111 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 NSG2Q9Y328 171 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 TMED3Q9Y3Q3 217 aa7.41□□□□□ -1.22
NEDD9-215ENST00000514660 C15orf62A8K5M9 175 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 PITX3O75364 302 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 ATG12O94817 140 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 GHRHP01286 108 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 DEFA4P12838 97 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 OR2B8PP59922 312 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 ERVK-16P61578 105 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 TMEM88Q6PEY1 159 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 TCF24Q7RTU0 167 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 FAM219AQ8IW50 185 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 OR10W1Q8NGF6 305 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 RRNAD1Q96FB5 475 aaKnown RBP7.4□□□□□ -1.22
NEDD9-215ENST00000514660 MS4A6AQ9H2W1 248 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 MGAT4CQ9UBM8 478 aa7.4□□□□□ -1.22
NEDD9-215ENST00000514660 TEX50A0A1B0GTY4 177 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 A0A1B0GU03 582 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 GOSR2O14653 212 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 NUPL2O15504 423 aaKnown RBP7.39□□□□□ -1.23
NEDD9-215ENST00000514660 CTSGP08311 255 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 SLC25A6P12236 298 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 MAS1LP35410 378 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 BCAP31P51572 246 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 AKR1C2P52895 323 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 H2BFSP57053 126 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 STHQ8IWL8 128 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 SCARB1Q8WTV0 552 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 ST8SIA2Q92186 375 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 BSCL2Q96G97 398 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-215ENST00000514660 C2orf50Q96LR7 162 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-215ENST00000514660 TMEM14BQ9NUH8 114 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 CACNG5Q9UF02 275 aa7.39□□□□□ -1.23
NEDD9-215ENST00000514660 PIGBOS1A0A0B4J2F0 54 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 IGHV3-66A0A0C4DH42 116 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 C5orf51A6NDU8 294 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 FAM25EA8MYX2 175 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 K7EIM0 57 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 SNAPC5O75971 98 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 DFFBO76075 338 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 HAMPP81172 84 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 ID3Q02535 119 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 SMCO1Q147U7 214 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 IAH1Q2TAA2 248 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-215ENST00000514660 AARDQ4LEZ3 155 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 GSG1LQ6UXU4 331 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 ZBTB8BQ8NAP8 495 aaPredicted RBP7.38□□□□□ -1.23
NEDD9-215ENST00000514660 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 OR4A16Q8NH70 328 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms