RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TMEM155Q4W5P6 130 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 COX8CQ7Z4L0 72 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 OR4F5Q8NH21 305 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 TMEM189A5PLL7 270 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 CGB1A6NKQ9 187 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 PPIAL4GP0DN37 164 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 NPY1RP25929 384 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 GCHFRP30047 84 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 Q8IYB0 196 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 LRRC29Q8WV35 223 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 VPS25Q9BRG1 176 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 MCRIP2Q9BUT9 160 aaKnown RBP5.94□□□□□ -1.46
CLIP1-205ENST00000514271 COMMD5Q9GZQ3 224 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 SLC39A9Q9NUM3 307 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 U3KQK5 164 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 DIDO1Q9BTC0 2240 aaKnown RBP5.94□□□□□ -1.46
CLIP1-205ENST00000514271 TRAV9-2A0A087WT02 112 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 TRAV26-1A0A087WT03 109 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF705GA8MUZ8 300 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-205ENST00000514271 J3QT63 122 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 FOXH1O75593 365 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 PLAUP00749 431 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 MMD2Q8IY49 270 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 C11orf42Q8N5U0 333 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 SLC25A2Q9BXI2 301 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 TNFRSF19Q9NS68 423 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 CLN8Q9UBY8 286 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 IZUMO1RA6ND01 250 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 C12orf77C9JDV5 145 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 PATE4P0C8F1 98 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 GPM6AP51674 278 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 AESQ08117 197 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 LOXL1Q08397 574 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-205ENST00000514271 SPATA45Q537H7 98 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF414Q96IQ9 312 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 POLDIP2Q9Y2S7 368 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 IGKV1D-37A0A075B6S9 117 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 OR7C1O76099 320 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-205ENST00000514271 CNIH1O95406 144 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 AMY1AP04745 511 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 IGLC1P0CG04 106 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 COL8A1P27658 744 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 TNXAQ16473 311 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 RNF151Q2KHN1 245 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 SPATA31B1PQ5VZV4 182 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 OR1L6Q8NGR2 347 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 PHLDA1Q8WV24 401 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-205ENST00000514271 FAM168AQ92567 244 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 OR5B12Q96R08 314 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 OR2D2Q9H210 308 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-205ENST00000514271 CFAP46Q8IYW2 2715 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 TRAV38-1A0A0B4J264 116 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 NXPH3O95157 252 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 NGFP01138 241 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 GNG3P63215 75 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 TNFAIP6P98066 277 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-205ENST00000514271 LINC01545Q5VT33 79 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 FAM71F2Q6NXP2 309 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 Q6ZVH6 145 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 ATP5L2Q7Z4Y8 100 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 ABHD12Q8N2K0 398 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 VN1R17PQ8TDU5 208 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 CIB3Q96Q77 187 aaPredicted RBP5.93□□□□□ -1.46
CLIP1-205ENST00000514271 VAMP8Q9BV40 100 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 IFI27L2Q9H2X8 130 aa5.93□□□□□ -1.46
CLIP1-205ENST00000514271 LHBP01229 141 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 IGLV2-11P01706 119 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 CRISP2P16562 243 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 RPL31P62899 125 aaKnown RBP5.92□□□□□ -1.46
CLIP1-205ENST00000514271 UTF1Q5T230 341 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 SAP30LQ9HAJ7 183 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 ZFYVE26Q68DK2 2539 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 PPIAL4EA0A075B759 164 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 PPIAL4CA0A0B4J2A2 164 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 PPIAL4DF5H284 164 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 IGHV1-46P01743 117 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 PPIAL4FP0DN26 164 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 GATA3P23771 443 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 CAMPP49913 170 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF134P52741 427 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 TEPPQ6URK8 271 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 SIGLEC15Q6ZMC9 328 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 SCGB1C1Q8TD33 95 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 C10orf105Q8TEF2 133 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 ST20Q9HBF5 79 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
CLIP1-205ENST00000514271 A0A1W2PPR1 153 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 SLC17A3O00476 420 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 G6PCP35575 357 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 LGALS7P47929 136 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 PMCHL1Q16048 86 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF488Q96MN9 340 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 A0A1W2PRE2 83 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 DIRC3C9JPN6 131 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 G3V4G9 280 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 MPV17P39210 176 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 ADAMTSL5Q6ZMM2 481 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF714Q96N38 554 aa5.91□□□□□ -1.46
CLIP1-205ENST00000514271 DSCAMO60469 2012 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms