RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 LINC00312Q9Y6C7 94 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 THADAQ6YHU6 1953 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 ZNF503-AS2A6NEH8 195 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 LOXL3P58215 753 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 TTC9CQ8N5M4 171 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 LEPP41159 167 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 TDRG1Q3Y452 100 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 FAM90A1Q86YD7 464 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 FER1L6-AS1Q8NA97 138 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 C18orf32Q8TCD1 76 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 PROK2Q9HC23 129 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 SRRM5B3KS81 715 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 NDUFA3O95167 84 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 TGFAP01135 160 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 PPIFP30405 207 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 FOXC1Q12948 553 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 STPG4Q8N801 248 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 C1orf162Q8NEQ5 155 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 SCRT1Q9BWW7 348 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 MRPL16Q9NX20 251 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 MRPL27Q9P0M9 148 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 ZNF257Q9Y2Q1 563 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 CHD3Q12873 2000 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 CACNA1HO95180 2353 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 SS18L1O75177 396 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-209ENST00000513761 DPF1Q92782 380 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 PHLDA3Q9Y5J5 127 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 GUSBP1Q15486 140 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 SSC4DQ8WTU2 575 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 RCHY1Q96PM5 261 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 MAJINQ3KP22 176 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 ZNRD1Q9P1U0 126 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 PSG8Q9UQ74 426 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 C19orf67A6NJJ6 358 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-209ENST00000513761 HBDP02042 147 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 IGKV1-16P04430 117 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 EVI2AP22794 236 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 SLAQ13239 276 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 CCDC144NLQ6NUI1 221 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 PRR7Q8TB68 274 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 NBASA2RRP1 2371 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 A0A1B0GV72 72 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 GAGE12BA1L429 117 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 V9GYV3 84 aa6.36□□□□□ -1.39
CLCN3-209ENST00000513761 NCR2O95944 276 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 DLX6P56179 175 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 SMAGPQ0VAQ4 97 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 WDR86Q86TI4 376 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 OR5AN1Q8NGI8 311 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 METTL26Q96S19 204 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 MRPS16Q9Y3D3 137 aaKnown RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 IGKV1D-17A0A075B6S4 117 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 M0R381 172 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 NTN3O00634 580 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 CDX4O14627 284 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 TDGF1P13385 188 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 SEC11AP67812 179 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 YLPM1P49750 1951 aaKnown RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 IFI27L1Q96BM0 104 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 MS4A6AQ9H2W1 248 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 APOMO95445 188 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 RPL15P61313 204 aaKnown RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 Q6AWC8 147 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 RASL11AQ6T310 242 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 TEX43Q6ZNM6 134 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 BEX4Q9NWD9 120 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 D6R8Y8 96 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 DGAT2L7PQ6IED9 249 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 RPUSD1Q9UJJ7 312 aaKnown RBP6.35□□□□□ -1.39
CLCN3-209ENST00000513761 A0A0G2JLM5 398 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 PMS2P5A8MQ11 134 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 PRSS2P07478 247 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 FTH1P19P0C7X4 201 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 IGLL1P15814 213 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 DTX1Q86Y01 620 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 OR4X2Q8NGF9 303 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 OR10J6PQ8NGY7 276 aa6.35□□□□□ -1.39
CLCN3-209ENST00000513761 A0A1B0GW15 77 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 GGTLC3B5MD39 225 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 TCRAP04437 139 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 PLA2G5P39877 138 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 FAM169BQ8N8A8 192 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 NEUROG1Q92886 237 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 K7EN84 100 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 SAMD5Q5TGI4 173 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 NCOA6Q14686 2063 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-209ENST00000513761 MEF2CQ06413 473 aaPredicted RBP6.34□□□□□ -1.39
CLCN3-209ENST00000513761 HSD52Q0P140 79 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 COA6Q5JTJ3 125 aaKnown RBP6.34□□□□□ -1.39
CLCN3-209ENST00000513761 UBTD1Q9HAC8 227 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 KIR2DL5BA0A0G2JN68 375 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 KIR2DL5BA0A0G2JPC4 375 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 BSPH1Q075Z2 132 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 GAGE1Q13065 139 aa6.34□□□□□ -1.39
CLCN3-209ENST00000513761 ZNF329Q86UD4 541 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms