RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 TSC22D3Q99576 134 aa4.11□□□□□ -1.75
GYPB-215ENST00000513677 ARPC5LQ9BPX5 153 aa4.11□□□□□ -1.75
GYPB-215ENST00000513677 NIPSNAP3BQ9BS92 247 aa4.11□□□□□ -1.75
GYPB-215ENST00000513677 FXYD6Q9H0Q3 95 aa4.11□□□□□ -1.75
GYPB-215ENST00000513677 DUSP21Q9H596 190 aa4.11□□□□□ -1.75
GYPB-215ENST00000513677 NDUFB11Q9NX14 153 aa4.11□□□□□ -1.75
GYPB-215ENST00000513677 NACAE9PAV3 2078 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 HSPG2P98160 4391 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 GPR31O00270 319 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 EBAG9O00559 213 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 CDK2AP2O75956 126 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 CD74P04233 296 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 SDC2P34741 201 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 OPRK1P41145 380 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 HOXA1P49639 335 aaPredicted RBP4.1□□□□□ -1.75
GYPB-215ENST00000513677 EIF2B2P49770 351 aaKnown RBP4.1□□□□□ -1.75
GYPB-215ENST00000513677 PRCDQ00LT1 54 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 TBCEQ15813 527 aaPredicted RBP4.1□□□□□ -1.75
GYPB-215ENST00000513677 SFXN4Q6P4A7 337 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 GSG1LQ6UXU4 331 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 TBC1D26Q86UD7 250 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 SLC25A38Q96DW6 304 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 CNBD2Q96M20 576 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 LINC00052Q96N35 136 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 C7orf50Q9BRJ6 194 aaKnown RBP4.1□□□□□ -1.75
GYPB-215ENST00000513677 PDCD10Q9BUL8 212 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 RNF167Q9H6Y7 350 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 AUNIPQ9H7T9 357 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 DIABLOQ9NR28 239 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 TXNL4BQ9NX01 149 aaKnown RBP4.1□□□□□ -1.75
GYPB-215ENST00000513677 MRPL36Q9P0J6 103 aaKnown RBP4.1□□□□□ -1.75
GYPB-215ENST00000513677 SSR3Q9UNL2 185 aa4.1□□□□□ -1.75
GYPB-215ENST00000513677 LOC100506127A0A0U1RQW1 187 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 FAM90A26D6RGX4 464 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 ANKRD65E5RJM6 399 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 H3BMM0 161 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 SCGB2A1O75556 95 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 CRYBB3P26998 211 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 HLA-DMAP28067 261 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 S100GP29377 79 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 FGF9P31371 208 aaPredicted RBP4.09□□□□□ -1.75
GYPB-215ENST00000513677 CBX5P45973 191 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 HSPE1P61604 102 aaKnown RBP4.09□□□□□ -1.75
GYPB-215ENST00000513677 DAD1P61803 113 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 TSPAN5P62079 268 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
GYPB-215ENST00000513677 DLK1P80370 383 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 SPATA12Q7Z6I5 190 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 C6orf223Q8N319 242 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 OR4B1Q8NGF8 309 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 OR6F1Q8NGZ6 308 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 RNASE11Q8TAA1 199 aaKnown RBP4.09□□□□□ -1.75
GYPB-215ENST00000513677 DCANP1Q8TF63 244 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 YTHDF1Q9BYJ9 559 aaKnown RBP4.09□□□□□ -1.75
GYPB-215ENST00000513677 ENY2Q9NPA8 101 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 RFNGQ9Y644 331 aa4.09□□□□□ -1.75
GYPB-215ENST00000513677 HERC1Q15751 4861 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 TMEM189A5PLL7 270 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 CLN5O75503 358 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 IGKV1-39P01597 117 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 IGKV1D-39P04432 117 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 RNASE2P10153 161 aaKnown RBP4.08□□□□□ -1.76
GYPB-215ENST00000513677 PGAM2P15259 253 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 HRH1P35367 487 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 ETV6P41212 452 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 HSPA13P48723 471 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 AKR1C2P52895 323 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 SUB1P53999 127 aaKnown RBP eCLIP4.08□□□□□ -1.76
GYPB-215ENST00000513677 RNF212Q495C1 297 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 GDF5OSQ5U4N7 250 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 C16orf54Q6UWD8 224 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 C9orf47Q6ZRZ4 202 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 COQ8AQ8NI60 647 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 Q8WTZ3 238 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 SEC22AQ96IW7 307 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 FAM210BQ96KR6 192 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 TMEM208Q9BTX3 173 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 SLC35B3Q9H1N7 401 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 FNDC4Q9H6D8 234 aaPredicted RBP4.08□□□□□ -1.76
GYPB-215ENST00000513677 GOLT1BQ9Y3E0 138 aa4.08□□□□□ -1.76
GYPB-215ENST00000513677 YTHDF2Q9Y5A9 579 aaKnown RBP4.08□□□□□ -1.76
GYPB-215ENST00000513677 NBDYA0A0U1RRE5 68 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 SMIM9A6NGZ8 99 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 ZNF705FA8MVS1 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-215ENST00000513677 F5H768 121 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 F6UB75 175 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 CORTO00230 105 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 HBE1P02100 147 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 IL4P05112 153 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 ZNF705DP0CH99 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-215ENST00000513677 ZNF705BP0CI00 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-215ENST00000513677 DEFB130BP0DP73 79 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 DEFB130AP0DP74 79 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 HLA-DRB4P13762 266 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 RND2P52198 227 aa4.07□□□□□ -1.76
GYPB-215ENST00000513677 AP2S1P53680 142 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms