RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 NPIPB3Q92617 1050 aa5.36□□□□□ -1.55
HTT-212ENST00000513639 MRPL36Q9P0J6 103 aaKnown RBP5.36□□□□□ -1.55
HTT-212ENST00000513639 HSPB7Q9UBY9 170 aa5.36□□□□□ -1.55
HTT-212ENST00000513639 U3KQE9 123 aa5.36□□□□□ -1.55
HTT-212ENST00000513639 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
HTT-212ENST00000513639 CCDC160A6NGH7 325 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 SNRPGP15A8MWD9 76 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 FAM90A26D6RGX4 464 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 LY6G6CO95867 125 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 TOMM40O96008 361 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 CFDP00746 253 aaPredicted RBP5.35□□□□□ -1.55
HTT-212ENST00000513639 IL4P05112 153 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 SLC25A6P12236 298 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 S100A7P31151 101 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 TCTAP57738 103 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
HTT-212ENST00000513639 ZNF124Q15973 351 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 LEMD1Q68G75 181 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 C16orf54Q6UWD8 224 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 OR51G1Q8NGK1 321 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 PHLDA1Q8WV24 401 aaPredicted RBP5.35□□□□□ -1.55
HTT-212ENST00000513639 ACY3Q96HD9 319 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 CIB3Q96Q77 187 aaPredicted RBP5.35□□□□□ -1.55
HTT-212ENST00000513639 RAB40CQ96S21 281 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 MRPL18Q9H0U6 180 aaKnown RBP5.35□□□□□ -1.55
HTT-212ENST00000513639 C11orf68Q9H3H3 251 aaKnown RBP5.35□□□□□ -1.55
HTT-212ENST00000513639 RBKSQ9H477 322 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 TMED3Q9Y3Q3 217 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 HYDINQ4G0P3 5121 aa5.35□□□□□ -1.55
HTT-212ENST00000513639 ZFP92A6NM28 416 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 C11orf94C9JXX5 98 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 BUB3O43684 328 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 PSG1P11464 419 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 MIFP14174 115 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 ID1P41134 155 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 SUPT4H1P63272 117 aaKnown RBP5.34□□□□□ -1.55
HTT-212ENST00000513639 ID3Q02535 119 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 GAMTQ14353 236 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 ACTL10Q5JWF8 245 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 SPANXN2Q5MJ10 180 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 C1orf194Q5T5A4 169 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 GGNBP1Q5YKI7 109 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 TMED4Q7Z7H5 227 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 LRTM2Q8N967 370 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 DCANP1Q8TF63 244 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 TMEM170AQ8WVE7 144 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 LINC00476Q8WZB0 136 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 SLC35E1Q96K37 410 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 C1QTNF4Q9BXJ3 329 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 HRH4Q9H3N8 390 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 NRN1Q9NPD7 142 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 FBXL17Q9UF56 701 aa5.34□□□□□ -1.55
HTT-212ENST00000513639 ZNF701M0R085 212 aaPredicted RBP5.33□□□□□ -1.56
HTT-212ENST00000513639 PITX3O75364 302 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 ZNF688P0C7X2 276 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 INPP1P49441 399 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 UBE2MP61081 183 aaKnown RBP5.33□□□□□ -1.56
HTT-212ENST00000513639 EWSR1Q01844 656 aaKnown RBP eCLIP5.33□□□□□ -1.56
HTT-212ENST00000513639 PSMG4Q5JS54 123 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 SAMD13Q5VXD3 122 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 LGALS9CQ6DKI2 356 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 OR8G2PQ6IF36 304 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 SIGLEC15Q6ZMC9 328 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
HTT-212ENST00000513639 FAM24BQ8N5W8 94 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 C2CD4CQ8TF44 421 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 GLMPQ8WWB7 406 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 RNF125Q96EQ8 232 aa5.33□□□□□ -1.56
HTT-212ENST00000513639 NAP1L6A6NFF2 107 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 KNCNA6PVL3 124 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 CENPXA8MT69 81 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 SYNGR2O43760 224 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 NXPH3O95157 252 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 SFT2D2O95562 160 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 IFNA21P01568 189 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 NKX2-1P43699 371 aaPredicted RBP5.32□□□□□ -1.56
HTT-212ENST00000513639 NANOS2P60321 138 aaKnown RBP5.32□□□□□ -1.56
HTT-212ENST00000513639 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
HTT-212ENST00000513639 CNPY1Q3B7I2 92 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 SPATA31B1PQ5VZV4 182 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 S100A7AQ86SG5 101 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 PPP1R14BQ96C90 147 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 TRGV9Q99603 122 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 PBDC1Q9BVG4 233 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 PRR13Q9NZ81 148 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 TBC1D24Q9ULP9 559 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 PAIP2BQ9ULR5 123 aaKnown RBP5.32□□□□□ -1.56
HTT-212ENST00000513639 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
HTT-212ENST00000513639 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 ZNF705EA8MWA4 302 aaPredicted RBP5.31□□□□□ -1.56
HTT-212ENST00000513639 H3BMM0 161 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
HTT-212ENST00000513639 ZNF90Q03938 601 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 CCDC190Q86UF4 302 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 OR8I2Q8N0Y5 310 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 TRIM63Q969Q1 353 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 SLC45A2Q9UMX9 530 aa5.31□□□□□ -1.56
HTT-212ENST00000513639 STRAPQ9Y3F4 350 aaKnown RBP5.31□□□□□ -1.56
HTT-212ENST00000513639 IGHV4-28A0A0C4DH34 117 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms