RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 FAM172AQ8WUF8 416 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 GPR146Q96CH1 333 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 ADAT3Q96EY9 351 aaPredicted RBP0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 HIST1H2BLQ99880 126 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 TMEM133Q9H2Q1 129 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 ADGRL3Q9HAR2 1447 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 SCN8AQ9UQD0 1980 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 HS3ST2Q9Y278 367 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 SLC35A3Q9Y2D2 325 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 FMN1Q68DA7 1419 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 TRBV19A0A075B6N1 114 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 TRAV12-1A0A0B4J245 112 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 TRAV1-1A0A0B4J248 108 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 C2orf70A6NJV1 201 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 CYB5BO43169 146 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 ATP5HO75947 161 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 PROSCO94903 275 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 UBL3O95164 117 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 SERPINA1P01009 418 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 CYBAP13498 195 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 SSR2P43308 183 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 RAB4BP61018 213 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 ARF6P62330 175 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 RHOGP84095 191 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 LYRM7Q5U5X0 104 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR10X1Q8NGY0 326 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR10J5Q8NHC4 309 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 TEX47Q8TBZ9 253 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 WFDC5Q8TCV5 224 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 ARL5AQ9Y689 179 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 DENND4CQ5VZ89 1909 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 SBF1O95248 1867 aa0.5□□□□□ -2.33
TRAPPC11-210ENST00000513600 MED1Q15648 1581 aaPredicted RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 MYO18AQ92614 2054 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 CHD3Q12873 2000 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 TRAV4A0A0B4J268 109 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 SULT1B1O43704 296 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 HYPMO75409 117 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 LYZL6O75951 148 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 IFNA7P01567 189 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 MGST1P10620 155 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 SRIP30626 198 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 RNASE4P34096 147 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 PIGPP57054 158 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 HSPE1P61604 102 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 RHOBP62745 196 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 EIF5AP63241 154 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 ESRGQ1W209 222 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 RRN3P1Q2M238 152 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 RNASE10Q5GAN6 216 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 BRMS1LQ5PSV4 323 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 GOLT1AQ6ZVE7 132 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 Q8N814 137 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR2T10Q8NGZ9 312 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 SFT2D1Q8WV19 159 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 C4orf3Q8WVX3 66 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 DGCR14Q96DF8 476 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 YPEL2Q96QA6 119 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 C9orf16Q9BUW7 83 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 IMUPQ9GZP8 106 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 ENY2Q9NPA8 101 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 ARMC1Q9NVT9 282 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 OPTCQ9UBM4 332 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 UTP11Q9Y3A2 253 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 FAM32AQ9Y421 112 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 ECM29Q5VYK3 1845 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 COL4A5P29400 1685 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 HECW1Q76N89 1606 aa0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 PCF11O94913 1555 aaKnown RBP0.49□□□□□ -2.33
TRAPPC11-210ENST00000513600 DOCK4Q8N1I0 1966 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 KIAA1549Q9HCM3 1950 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 MYH7BA7E2Y1 1941 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 OBSL1O75147 1896 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 KIF1BO60333 1816 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 KNTC1P50748 2209 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 TRGV10A0A0A0MS01 117 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 C1orf196B1AJZ1 125 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 CLDN25C9JDP6 229 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 M0R2N4 97 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 C1QBP02746 253 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 SRP14P37108 136 aaKnown RBP0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 ATP5G3P48201 142 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 SERPINB9P50453 376 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 KRR1Q13601 381 aaKnown RBP0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 C1orf137Q5JT78 98 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 C22orf39Q6P5X5 142 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 DHRS4L2Q6PKH6 230 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 SPATA8Q6RVD6 105 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 C3orf56Q8N813 242 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 PXT1Q8NFP0 134 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 ZNF418Q8TF45 676 aaPredicted RBP0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 SLAMF6Q96DU3 332 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 PHB2Q99623 299 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 LINC00467Q9BRT7 94 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 PRADC1Q9BSG0 188 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 TMEM126AQ9H061 195 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 PSTPIP2Q9H939 334 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 BCL2L10Q9HD36 194 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 C14orf132Q9NPU4 83 aa0.48□□□□□ -2.33
TRAPPC11-210ENST00000513600 PYCARDQ9ULZ3 195 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms