RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 GSG1LQ6UXU4 331 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 CCDC71LQ8N9Z2 235 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 TMEM170AQ8WVE7 144 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 TMEM222Q9H0R3 208 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 COPZ2Q9P299 210 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 HLA-DRB4X5D2U9 266 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
TCOF1-212ENST00000513538 CRYM-AS1A6NIL9 109 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 NXPH3O95157 252 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 OR5AC1P0C628 307 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 AKAIN1P0CW23 69 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 AKR1C2P52895 323 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 DHODHQ02127 395 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 IL18Q14116 193 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 SELENOHQ8IZQ5 122 aaKnown RBP6.84□□□□□ -1.31
TCOF1-212ENST00000513538 OR52E5Q8NH55 327 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 NEU1Q99519 415 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 C1QTNF4Q9BXJ3 329 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 RBM38Q9H0Z9 239 aaKnown RBP6.84□□□□□ -1.31
TCOF1-212ENST00000513538 NAA60Q9H7X0 242 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 DKK2Q9UBU2 259 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 TMEM56-RWDD3S4R434 201 aa6.84□□□□□ -1.31
TCOF1-212ENST00000513538 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 DISC1C4P0D8 188 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 BUB3O43684 328 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 ATG12O94817 140 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 IGKV3-20P01619 116 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 IL4P05112 153 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 NPY1RP25929 384 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 SUB1P53999 127 aaKnown RBP eCLIP6.83□□□□□ -1.32
TCOF1-212ENST00000513538 TNP2Q05952 138 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 FAM222AQ5U5X8 452 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 SIGLEC15Q6ZMC9 328 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 FAM219AQ8IW50 185 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 ZNF709Q8N972 641 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 OR51S1Q8NGJ8 323 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 OR1S2Q8NGQ3 325 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 NARS2Q96I59 477 aaKnown RBP6.83□□□□□ -1.32
TCOF1-212ENST00000513538 WDR12Q9GZL7 423 aaKnown RBP6.83□□□□□ -1.32
TCOF1-212ENST00000513538 NRN1Q9NPD7 142 aa6.83□□□□□ -1.32
TCOF1-212ENST00000513538 RSL24D1Q9UHA3 163 aaKnown RBP6.83□□□□□ -1.32
TCOF1-212ENST00000513538 TRAV30A0A087WSZ9 112 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 FABP12A6NFH5 140 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 IFNA21P01568 189 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 HTN3P15516 51 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 OR10J1P30954 320 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 EIF2B2P49770 351 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 NUTF2P61970 127 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 SNRPD3P62318 126 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 SUPT4H1P63272 117 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 TRIM16LQ309B1 348 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 TMEM88Q6PEY1 159 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 MCFD2Q8NI22 146 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 RBPMSQ93062 196 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 TRIM63Q969Q1 353 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 GPR146Q96CH1 333 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 PRRT1Q99946 306 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 PDCD10Q9BUL8 212 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 SLC35B3Q9H1N7 401 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 SEPSECSQ9HD40 501 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 ENY2Q9NPA8 101 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 C14orf166Q9Y224 244 aaKnown RBP6.82□□□□□ -1.32
TCOF1-212ENST00000513538 V9GYH0 126 aa6.82□□□□□ -1.32
TCOF1-212ENST00000513538 SMIM9A6NGZ8 99 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 C16orf90A8MZG2 172 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 SOCS3O14543 225 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 CDK2AP2O75956 126 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 TOMM40O96008 361 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 NKX2-1P43699 371 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-212ENST00000513538 AP2S1P53680 142 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-212ENST00000513538 SPCS3P61009 180 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 KLF9Q13886 244 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-212ENST00000513538 ZNF79Q15937 498 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 RNF212Q495C1 297 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 C2orf83Q53S99 150 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 LINC00528Q8N1L1 170 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 MAPKAPK5-AS1Q8N8E1 139 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 Q8WTZ3 238 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 IL22RA2Q969J5 263 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 RRNAD1Q96FB5 475 aaKnown RBP6.81□□□□□ -1.32
TCOF1-212ENST00000513538 FAM210BQ96KR6 192 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 NIPSNAP3BQ9BS92 247 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 SAV1Q9H4B6 383 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-212ENST00000513538 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-212ENST00000513538 RFNGQ9Y644 331 aa6.81□□□□□ -1.32
TCOF1-212ENST00000513538 RPS10-NUDT3A0A1W2PQS6 291 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 TMEM189A5PLL7 270 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 F6UB75 175 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 SCGB2A1O75556 95 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 PSG1P11464 419 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 SLC25A4P12235 298 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 HTR2BP41595 481 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 OXA1LQ15070 435 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 NMSQ5H8A3 153 aa6.8□□□□□ -1.32
TCOF1-212ENST00000513538 SOHLH1Q5JUK2 328 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms