RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PFDN2Q9UHV9 154 aa9.1□□□□□ -0.95
VEGFA-216ENST00000512683 A0A0B4J2A0 478 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 P0DMU3 169 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 FAM231AP0DMU4 169 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 FAM231CP0DMU5 169 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 CCR6P51684 374 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 RND2P52198 227 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
VEGFA-216ENST00000512683 ETFRF1Q6IPR1 90 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 FAM210BQ96KR6 192 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 RBM38Q9H0Z9 239 aaKnown RBP9.09□□□□□ -0.95
VEGFA-216ENST00000512683 SHPKQ9UHJ6 478 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 X6R8D5 127 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
VEGFA-216ENST00000512683 HECTD4Q9Y4D8 3996 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 SMIM9A6NGZ8 99 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 AMBPP02760 352 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 HNRNPCP07910 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
VEGFA-216ENST00000512683 ZNF688P0C7X2 276 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 NUP62P37198 522 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-216ENST00000512683 DHRS2Q13268 280 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 SMCO1Q147U7 214 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 PYDC2Q56P42 97 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 ACTL10Q5JWF8 245 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 Q6ZTC4 211 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 CCDC190Q86UF4 302 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 NEU1Q99519 415 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 RBKSQ9H477 322 aa9.08□□□□□ -0.96
VEGFA-216ENST00000512683 ELOA3CA0A087WX78 387 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-216ENST00000512683 DEFB131BA0A096LNP1 70 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 PITX3O75364 302 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 OR10J1P30954 320 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 ATP5IP56385 69 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-216ENST00000512683 LGI3Q8N145 548 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 TOMM5Q8N4H5 51 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 NPIPB3Q92617 1050 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 CLUHP3Q96NS8 147 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 U3KQ87 197 aa9.07□□□□□ -0.96
VEGFA-216ENST00000512683 TEX48A0A1B0GUV7 120 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 IFNA10P01566 189 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 C4BPBP20851 252 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 FAUP35544 74 aaKnown RBP9.06□□□□□ -0.96
VEGFA-216ENST00000512683 SRPXP78539 464 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
VEGFA-216ENST00000512683 C12orf74Q32Q52 190 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 TMEM128Q5BJH2 165 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 TMED4Q7Z7H5 227 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 DTD1Q8TEA8 209 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 ACY3Q96HD9 319 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 NDUFAF3Q9BU61 184 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 NRN1Q9NPD7 142 aa9.06□□□□□ -0.96
VEGFA-216ENST00000512683 PIGBOS1A0A0B4J2F0 54 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 CCDC160A6NGH7 325 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 FAM90A26D6RGX4 464 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 H3BMM0 161 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 BUB3O43684 328 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 RD3LP0DJH9 198 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 ANXA3P12429 323 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 NKX2-1P43699 371 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-216ENST00000512683 AP3S2P59780 193 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 PSMG4Q5JS54 123 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 SPATA31B1PQ5VZV4 182 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
VEGFA-216ENST00000512683 DUXBA0A1W2PPF3 345 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 ZNF701M0R085 212 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-216ENST00000512683 TOMM40O96008 361 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 IL4P05112 153 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 SPART-AS1P0CW21 52 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 PSG1P11464 419 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 S100A5P33763 92 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 GAMTQ14353 236 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 SAMD13Q5VXD3 122 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 OR1S1Q8NH92 325 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 DEDD2Q8WXF8 326 aa9.04□□□□□ -0.96
VEGFA-216ENST00000512683 SLC25A21Q9BQT8 299 aaPredicted RBP9.04□□□□□ -0.96
VEGFA-216ENST00000512683 DNAH6Q9C0G6 4158 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 IGKV1D-37A0A075B6S9 117 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 SLC25A6P12236 298 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 HLA-DRB4P13762 266 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 VAMP1P23763 118 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 GPX4P36969 197 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-216ENST00000512683 ID1P41134 155 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 PPP1R1AQ13522 171 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 C1orf194Q5T5A4 169 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 OR8G2PQ6IF36 304 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 ZNF705AQ6ZN79 300 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-216ENST00000512683 SRRQ9GZT4 340 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 CLEC5AQ9NY25 188 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 HLA-DRB4X5D2U9 266 aa9.03□□□□□ -0.96
VEGFA-216ENST00000512683 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
VEGFA-216ENST00000512683 ZNF705FA8MVS1 300 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms