RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 I3L2K1 104 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 TOMM40O96008 361 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 MOSP00540 346 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 APCSP02743 223 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 IGLC1P0CG04 106 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 TCL1AP56279 114 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 UBE2G1P62253 170 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 CT83Q5H943 113 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 SIGLECL1Q8N7X8 197 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 OR11H6Q8NGC7 330 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 OR8B3Q8NGG8 313 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
CPNE4-210ENST00000512332 FMC1Q96HJ9 113 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 OR8B2Q96RD0 313 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 TBX15Q96SF7 602 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 HSPB9Q9BQS6 159 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 SAMD10Q9BYL1 202 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 BSNQ9UPA5 3926 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 TRAV34A0A0B4J273 112 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 LYNX1G3V0Z9 82 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 SIAH2O43255 324 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 SPINK4O60575 86 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 SLC25A5P05141 298 aaKnown RBP7.36□□□□□ -1.23
CPNE4-210ENST00000512332 LYNX1P0DP58 116 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 MRPL54Q6P161 138 aaKnown RBP7.36□□□□□ -1.23
CPNE4-210ENST00000512332 NHLRC2Q8NBF2 726 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 NUP35Q8NFH5 326 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 KCNS1Q96KK3 526 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 C20orf144Q9BQM9 153 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 MRPL27Q9P0M9 148 aaKnown RBP7.36□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF492Q9P255 531 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 PTPRZ1P23471 2315 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 F2Z2F3 143 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF253O75346 499 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 LTAP01374 205 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 SSTP61278 116 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 SLC35B1P78383 322 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 FBXL15Q9H469 300 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 RNF24Q9Y225 148 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 HIGD1AQ9Y241 93 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 MSRB2Q9Y3D2 182 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 PIEZO2Q9H5I5 2752 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 A0A1W2PS18 150 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF705FA8MVS1 300 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 OR2J3O76001 311 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 CA1P00915 261 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 TCRAP04437 139 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF705DP0CH99 300 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF705BP0CI00 300 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 PSG1P11464 419 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 SRIP30626 198 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 UCNP55089 124 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF600Q6ZNG1 722 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 NPBQ8NG41 125 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 RAB1BQ9H0U4 201 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 OTORQ9NRC9 128 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF586Q9NXT0 402 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 DPM3Q9P2X0 92 aa7.35□□□□□ -1.23
CPNE4-210ENST00000512332 SOX21Q9Y651 276 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-210ENST00000512332 ATMQ13315 3056 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 TRBV6-1A0A0K0K1D8 114 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 FAM231BA6NCW3 169 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 M0R1W7 72 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 COX7A1P24310 79 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 HTR1DP28221 377 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 DLX1P56177 255 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 GNG5P63218 68 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 KLF5Q13887 457 aaPredicted RBP7.34□□□□□ -1.23
CPNE4-210ENST00000512332 TOMM20LQ6UXN7 152 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 BLNKQ8WV28 456 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 TMEM68Q96MH6 324 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 NEU1Q99519 415 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 SSBP3Q9BWW4 388 aaPredicted RBP7.34□□□□□ -1.23
CPNE4-210ENST00000512332 WNT10AQ9GZT5 417 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 Q9H3A6 140 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 PTPRQQ9UMZ3 2332 aa7.34□□□□□ -1.23
CPNE4-210ENST00000512332 TLN1Q9Y490 2541 aaKnown RBP7.34□□□□□ -1.24
CPNE4-210ENST00000512332 A0A1B0GXF2 115 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 FAM90A27PA6NNH2 459 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 HIGD1CA8MV81 97 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 A8MWL6 223 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 CCL21O00585 134 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 ZNF324O75467 553 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-210ENST00000512332 NDUFA3O95167 84 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 CEACAM3P40198 252 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 SLAQ13239 276 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 KIAA1644Q3SXP7 199 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 TIMD4Q96H15 378 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 RASL11BQ9BPW5 248 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 SLC25A39Q9BZJ4 359 aaPredicted RBP7.33□□□□□ -1.24
CPNE4-210ENST00000512332 NRN1Q9NPD7 142 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 TBL2Q9Y4P3 447 aaKnown RBP7.33□□□□□ -1.24
CPNE4-210ENST00000512332 ADGRG4Q8IZF6 3080 aa7.33□□□□□ -1.24
CPNE4-210ENST00000512332 A0A1B0GV90 55 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms