RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TCRBV4S1A1TA0A5B7 111 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 ANKRD34BA5PLL1 514 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 NCBP2LA6PVI3 153 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 H3BUA1 57 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 IGHG2P01859 326 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 AMY1AP04745 511 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 LINC00869P0C866 280 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 ZP3P21754 424 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 PLP1P60201 277 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 OR5AU1Q8NGC0 362 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 FAM213BQ8TBF2 198 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 WIPF2Q8TF74 440 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 PCNPQ8WW12 178 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 TXN2Q99757 166 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 ACTR3CQ9C0K3 210 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 WNT10AQ9GZT5 417 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 SLC39A9Q9NUM3 307 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 THYN1Q9P016 225 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 DMRT1Q9Y5R6 373 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 SACSQ9NZJ4 4579 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 IGKV1D-37A0A075B6S9 117 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 TRAV30A0A087WSZ9 112 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 TRBV9A0A0B4J1U6 114 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 PSMB11A5LHX3 300 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 K7EIM0 57 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 YIF1AO95070 293 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 FHITP49789 147 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 PPT1P50897 306 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 B2MP61769 119 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 GNB1P62873 340 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 ZNF616Q08AN1 781 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 ZNF726P1Q15940 193 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 TMEM95Q3KNT9 176 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 FFAR4Q5NUL3 377 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 Q6ZS46 218 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 STPG3Q8N7X2 389 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 OR10G4Q8NGN3 311 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 VN1R17PQ8TDU5 208 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 GATAD1Q8WUU5 269 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 TMEM190Q8WZ59 177 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 RCHY1Q96PM5 261 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 PRR25Q96S07 402 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 HRH4Q9H3N8 390 aa8.12□□□□□ -1.11
PDLIM5-217ENST00000512274 SMCO3A2RU48 225 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 SH2D7A6NKC9 451 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 CLN5O75503 358 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 MT-CO2P00403 227 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 FABP1P07148 127 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 OR5G3P0C626 314 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 STAG3L2P0CL84 134 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 STAG3L3P0CL85 134 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 PSMB3P49720 205 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 KHDC1LQ5JSQ8 128 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 CYP2G1PQ6ZSU1 146 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 OR10G9Q8NGN4 311 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 OR10G7Q8NGN6 311 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 SUN5Q8TC36 379 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 ABHD5Q8WTS1 349 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 PFDN5Q99471 154 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 TXNDC17Q9BRA2 123 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 MRPL32Q9BYC8 188 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 RFNGQ9Y644 331 aa8.11□□□□□ -1.11
PDLIM5-217ENST00000512274 ELOA3CA0A087WX78 387 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 TMEM218A2RU14 115 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 MAP1LC3B2A6NCE7 125 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 IGLC1P0CG04 106 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 OR10J1P30954 320 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 NPBWR1P48145 328 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 CDC34P49427 236 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 RND2P52198 227 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 YPEL3P61236 119 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 RHOBP62745 196 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 PEA15Q15121 130 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 TCTEX1D4Q5JR98 221 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 TOR2AQ5JU69 321 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 ZNF506Q5JVG8 444 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 Q8N2B8 174 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 LINC00482Q8N8I6 264 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 OR1L4Q8NGR5 311 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 NPIPB3Q92617 1050 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 RAB24Q969Q5 203 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 CITED4Q96RK1 184 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 HSPB9Q9BQS6 159 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 GPR61Q9BZJ8 451 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 MAP1LC3BQ9GZQ8 125 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 VSIRQ9H7M9 311 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 MANBALQ9NQG1 85 aa8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 CARHSP1Q9Y2V2 147 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-217ENST00000512274 I3L521 148 aa8.09□□□□□ -1.11
PDLIM5-217ENST00000512274 ATP6V0E1O15342 81 aa8.09□□□□□ -1.11
PDLIM5-217ENST00000512274 SCGB2A1O75556 95 aa8.09□□□□□ -1.11
PDLIM5-217ENST00000512274 DEFA4P12838 97 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms