RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CSTL1Q9H114 145 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 HRH4Q9H3N8 390 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 ZNF430Q9H8G1 570 aaPredicted RBP6.59□□□□□ -1.35
NUP54-211ENST00000512151 BET1LQ9NYM9 111 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 TNFSF18Q9UNG2 199 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 NACAE9PAV3 2078 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 A0A1B0GW64 132 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 ZNF320A2RRD8 509 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 CGB1A6NKQ9 187 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 FAM223BA6NKX1 122 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 CCSO14618 274 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 IGHV3-23P01764 117 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 HOXB5P09067 269 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 C8orf88P0DMB2 117 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 OR2F1Q13607 317 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 PRSS8Q16651 343 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 NMSQ5H8A3 153 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 C10orf55Q5SWW7 151 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 GSG1LQ6UXU4 331 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 RBPMS2Q6ZRY4 209 aaKnown RBP6.58□□□□□ -1.36
NUP54-211ENST00000512151 C19orf35Q6ZS72 473 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 ZNF546Q86UE3 836 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 SLC51BQ86UW2 128 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 FAM223AQ8IWN6 122 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 KCNRGQ8N5I3 272 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 SCARB1Q8WTV0 552 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 PPP1R1CQ8WVI7 109 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 ARL6Q9H0F7 186 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 S4R3C0 116 aa6.58□□□□□ -1.36
NUP54-211ENST00000512151 PIGBOS1A0A0B4J2F0 54 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 RNF222A6NCQ9 220 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 OR2J3O76001 311 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 AKR1C2P52895 323 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 OR2B8PP59922 312 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 RAB14P61106 215 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 ERVK-16P61578 105 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 TNXAQ16473 311 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 C15orf32Q32M92 178 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 GGNBP1Q5YKI7 109 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 ACOT7LQ6ZUV0 252 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 H2BFWTQ7Z2G1 175 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 SPATA12Q7Z6I5 190 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 VSTM2AQ8TAG5 236 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 THAP6Q8TBB0 222 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 LSM10Q969L4 123 aaKnown RBP6.57□□□□□ -1.36
NUP54-211ENST00000512151 OR10C1Q96KK4 312 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 SPAG8Q99932 426 aaPredicted RBP6.57□□□□□ -1.36
NUP54-211ENST00000512151 QTRT1Q9BXR0 403 aaKnown RBP6.57□□□□□ -1.36
NUP54-211ENST00000512151 MED9Q9NWA0 146 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 ELOA3CA0A087WX78 387 aaPredicted RBP6.57□□□□□ -1.36
NUP54-211ENST00000512151 IGHV4-28A0A0C4DH34 117 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 TEX50A0A1B0GTY4 177 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 DUXBA0A1W2PPF3 345 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 C5orf51A6NDU8 294 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 FAM25EA8MYX2 175 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 BCL2L11O43521 198 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 PITX3O75364 302 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 IFNA10P01566 189 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 PSMB6P28072 239 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 SRPXP78539 464 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 IL15RAQ13261 267 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 MMD2Q8IY49 270 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 C2orf50Q96LR7 162 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 AIFM2Q9BRQ8 373 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 CACNG5Q9UF02 275 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 CELA1Q9UNI1 258 aa6.57□□□□□ -1.36
NUP54-211ENST00000512151 DEFB131BA0A096LNP1 70 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 C15orf61A6NNL5 157 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 TEX22C9J3V5 150 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 TSPAN4O14817 238 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 ST8SIA3O43173 380 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 NXPH3O95157 252 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 ADMP35318 185 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 ARL3P36405 182 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 AP2S1P53680 142 aaPredicted RBP6.56□□□□□ -1.36
NUP54-211ENST00000512151 KRTAP10-2P60368 255 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 RPL8P62917 257 aaKnown RBP6.56□□□□□ -1.36
NUP54-211ENST00000512151 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 AARDQ4LEZ3 155 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 Q5VSD8 79 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 CLEC19AQ6UXS0 136 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 FAM219AQ8IW50 185 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 NECAP1Q8NC96 275 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 OR10W1Q8NGF6 305 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 OR4A16Q8NH70 328 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 RNASE11Q8TAA1 199 aaKnown RBP6.56□□□□□ -1.36
NUP54-211ENST00000512151 SRSF12Q8WXF0 261 aaKnown RBP6.56□□□□□ -1.36
NUP54-211ENST00000512151 RRNAD1Q96FB5 475 aaKnown RBP6.56□□□□□ -1.36
NUP54-211ENST00000512151 NDUFAF3Q9BU61 184 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 TMEM14BQ9NUH8 114 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 MBD2Q9UBB5 411 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 TMED3Q9Y3Q3 217 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 OR51B2Q9Y5P1 312 aa6.56□□□□□ -1.36
NUP54-211ENST00000512151 A0A1B0GU03 582 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 KANTRA0A1W2PQU2 76 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 H0YIZ8 118 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 ATG12O94817 140 aa6.55□□□□□ -1.36
NUP54-211ENST00000512151 CA1P00915 261 aaPredicted RBP6.55□□□□□ -1.36
NUP54-211ENST00000512151 NMBP08949 121 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms