RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZNF48Q96MX3 618 aaPredicted RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 YPEL2Q96QA6 119 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 MRPS18CQ9Y3D5 142 aaKnown RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 RAMP1O60894 148 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 TIMP3P35625 211 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 IFITM3Q01628 133 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 POLEQ07864 2286 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 RBMY1FQ15415 496 aaKnown RBP4.79□□□□□ -1.64
USP38-203ENST00000511739 ZNF562Q6V9R5 426 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 IL36BQ9NZH7 164 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 SCO2A0A1W2PP80 73 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 LINC01549A6NIU2 74 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 SLC17A3O00476 420 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 TFF3Q07654 80 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 TEX43Q6ZNM6 134 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 TMEM144Q7Z5S9 345 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 WFDC6Q9BQY6 131 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 KLF12Q9Y4X4 402 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 IGHV1-18A0A0C4DH31 117 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 A0A0G2JK05 382 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 OOSP1A8MZH6 123 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 F2Z2F3 143 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 EVI2AP22794 236 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 FLVCR1-AS1Q8TAF5 88 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 ORAOV1Q8WV07 137 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 USMG5Q96IX5 58 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 C1QTNF5Q9BXJ0 243 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 CADP27708 2225 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 HIGD1CA8MV81 97 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 DPM2O94777 84 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 PPBPP02775 128 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 GNG5P63218 68 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 C9orf62Q8N4C0 152 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 C5orf66Q9H5L9 145 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 SPCS1Q9Y6A9 102 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 LINC00114Q6XXX2 140 aa4.79□□□□□ -1.64
USP38-203ENST00000511739 TRBV7-1A0A0A6YYK4 115 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 IGHV2-26A0A0B4J1V2 119 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TNFRSF6BO95407 300 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 CD59P13987 128 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 CD300EQ496F6 205 aaPredicted RBP4.78□□□□□ -1.64
USP38-203ENST00000511739 TRBV5-7A0A0A0MS05 114 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TEX48A0A1B0GUV7 120 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 NDUFS8O00217 210 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 CA1P00915 261 aaPredicted RBP4.78□□□□□ -1.64
USP38-203ENST00000511739 ZNF114Q8NC26 417 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 MAPK1IP1LQ8NDC0 245 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 MSRB2Q9Y3D2 182 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 GATA3P23771 443 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 UBE2BP63146 152 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TMEM249Q2WGJ8 235 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 ZNF660Q6AZW8 331 aaPredicted RBP4.78□□□□□ -1.64
USP38-203ENST00000511739 BPESC1Q9GZL8 116 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 NPIPB5A8MRT5 1133 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TMEM14DPA8MWL7 114 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 SYNJ2BPP57105 145 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 MORN2Q502X0 79 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TPTE2P1Q5T6R2 138 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 SPRR3Q9UBC9 169 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 DKK4Q9UBT3 224 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 GBF1Q92538 1859 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 TRAV8-4A0A0B4J246 113 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 IZUMO1RA6ND01 250 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 H3BMM0 161 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 ITGB1BP1O14713 200 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 SIGLEC5O15389 551 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 DEFB131AP59861 70 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
USP38-203ENST00000511739 ST6GALNAC6Q969X2 333 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 UBE2WQ96B02 151 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 ZNF625Q96I27 306 aaPredicted RBP4.78□□□□□ -1.64
USP38-203ENST00000511739 RCC1LQ96I51 464 aaKnown RBP4.78□□□□□ -1.64
USP38-203ENST00000511739 DNAJC30Q96LL9 226 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 ERG28Q9UKR5 140 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 EPDR1Q9UM22 224 aa4.78□□□□□ -1.64
USP38-203ENST00000511739 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 NDPQ00604 133 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 C14orf144Q96I85 54 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 MBD3L4A6NDZ8 208 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 MBD3L3A6NE82 208 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 MBD3L5A6NJ08 208 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 MSMBP08118 114 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 LINC01590Q5TEZ4 76 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 MRPL14Q6P1L8 145 aaKnown RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 C9orf139Q6ZV77 190 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 TMEM256Q8N2U0 113 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 ZNF525Q8N782 197 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 MBD3L2Q8NHZ7 208 aaPredicted RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 MBNL3Q9NUK0 354 aaKnown RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 NHP2Q9NX24 153 aaKnown RBP4.77□□□□□ -1.65
USP38-203ENST00000511739 PGPEP1LA6NFU8 196 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 LEPROTO15243 131 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 CR1LQ2VPA4 569 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
USP38-203ENST00000511739 PLXNA2O75051 1894 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms