RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 HRNRQ86YZ3 2850 aaPredicted RBP13.17□□□□□ -0.3
CLMAT3-201ENST00000510576 KIR3DL3Q8N743 410 aa13.17□□□□□ -0.3
CLMAT3-201ENST00000510576 SERTAD4Q9NUC0 356 aa13.17□□□□□ -0.3
CLMAT3-201ENST00000510576 DCHS2Q6V1P9 2916 aa13.17□□□□□ -0.3
CLMAT3-201ENST00000510576 NBASA2RRP1 2371 aa13.17□□□□□ -0.3
CLMAT3-201ENST00000510576 COL6A6A6NMZ7 2263 aa13.17□□□□□ -0.3
CLMAT3-201ENST00000510576 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 CDKN1AP38936 164 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 IER3P46695 156 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 LYZP61626 148 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 JOSD1Q15040 202 aaPredicted RBP13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 C1orf122Q6ZSJ8 110 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 VMO1Q7Z5L0 202 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 NHLRC2Q8NBF2 726 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 OR5R1Q8NH85 324 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 RASL11BQ9BPW5 248 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 A0A1W2PPR1 153 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 PSG1P11464 419 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 GP9P14770 177 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 CD24P25063 80 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 GNG5P63218 68 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 CX3CL1P78423 397 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 CCDC144NLQ6NUI1 221 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 UBTD1Q9HAC8 227 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 EPDR1Q9UM22 224 aa13.16□□□□□ -0.3
CLMAT3-201ENST00000510576 TRAV34A0A0B4J273 112 aa13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 PGPA6NDG6 321 aa13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 SNURFLB1AK76 121 aa13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 UBE2G1P62253 170 aa13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 IGFBPL1Q8WX77 278 aa13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
CLMAT3-201ENST00000510576 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 TCL1AP56279 114 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 TMEM183BQ1AE95 376 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 COX19Q49B96 90 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 WDR73Q6P4I2 378 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 PRDM13Q9H4Q3 707 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 CFAP46Q8IYW2 2715 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 K7EIM0 57 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 LEMD1Q68G75 181 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 FAM231DQ6ZW35 169 aa13.14□□□□□ -0.31
CLMAT3-201ENST00000510576 RELNP78509 3460 aa13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 A6NNC1 897 aa13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 OOSP1A8MZH6 123 aa13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 MT-ND6P03923 174 aa13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 HOXB4P17483 251 aaPredicted RBP13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
CLMAT3-201ENST00000510576 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 GRIFINA4D1Z8 144 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 SPINK4O60575 86 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 NDUFS7O75251 213 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 FRMD6-AS1P0C7T7 363 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 GZMBP10144 247 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 CRISP2P16562 243 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 MINOS1Q5TGZ0 78 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 TMEM256Q8N2U0 113 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 ITLN2Q8WWU7 325 aaPredicted RBP13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 RBM14Q96PK6 669 aaKnown RBP13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 ATG101Q9BSB4 218 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 SLC25A39Q9BZJ4 359 aaPredicted RBP13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 MINOS1-NBL1R4GNA1 71 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 KMT2BQ9UMN6 2715 aaPredicted RBP13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 IGKV1-17P01599 117 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 FBLN7Q53RD9 439 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 Q9H3A6 140 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 TMEM14CQ9P0S9 112 aa13.12□□□□□ -0.31
CLMAT3-201ENST00000510576 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 AMY1AP04745 511 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 EFNA4P52798 201 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 CMTM2Q8TAZ6 248 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 NAT8BQ9UHF3 227 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 KLF12Q9Y4X4 402 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 HIVEP3Q5T1R4 2406 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 SLC35B1P78383 322 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 TMEM136Q6ZRR5 245 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 DYNAPQ8N1N2 210 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 MRPL27Q9P0M9 148 aaKnown RBP13.11□□□□□ -0.31
CLMAT3-201ENST00000510576 TACC2O95359 2948 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 NCBP2LA6PVI3 153 aaKnown RBP13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 NPIPB5A8MRT5 1133 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 H3BTX0 84 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms