RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GATAD1Q8WUU5 269 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 PBDC1Q9BVG4 233 aa13.76□□□□□ -0.21
UBE3D-207ENST00000509102 A0A0J9YWU9 116 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 LCE6AA0A183 80 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 C9orf170A2RU37 121 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 K7EQG2 157 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 WRBO00258 174 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 DHRS2Q13268 280 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 GAMTQ14353 236 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 USF2Q15853 346 aaPredicted RBP13.75□□□□□ -0.21
UBE3D-207ENST00000509102 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 C16orf54Q6UWD8 224 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 RNF125Q96EQ8 232 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 MAGT1Q9H0U3 335 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 U3KQE9 123 aa13.75□□□□□ -0.21
UBE3D-207ENST00000509102 CA1P00915 261 aaPredicted RBP13.74□□□□□ -0.21
UBE3D-207ENST00000509102 OR4E1P0C645 316 aa13.74□□□□□ -0.21
UBE3D-207ENST00000509102 ZNF688P0C7X2 276 aa13.74□□□□□ -0.21
UBE3D-207ENST00000509102 IL7P13232 177 aa13.74□□□□□ -0.21
UBE3D-207ENST00000509102 SNRPD3P62318 126 aaKnown RBP13.74□□□□□ -0.21
UBE3D-207ENST00000509102 OR8G2PQ6IF36 304 aa13.74□□□□□ -0.21
UBE3D-207ENST00000509102 RYR3Q15413 4870 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 CXorf65A6NEN9 183 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 SNRPGP15A8MWD9 76 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 SIGLEC15Q6ZMC9 328 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 FAM24BQ8N5W8 94 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 DCANP1Q8TF63 244 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 GLMPQ8WWB7 406 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 RARRES2Q99969 163 aa13.73□□□□□ -0.21
UBE3D-207ENST00000509102 STRAPQ9Y3F4 350 aaKnown RBP13.73□□□□□ -0.21
UBE3D-207ENST00000509102 TENM2Q9NT68 2774 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 BUB3O43684 328 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-207ENST00000509102 ATF4P18848 351 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-207ENST00000509102 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 SPANXN5Q5MJ07 72 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 NRN1Q9NPD7 142 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 FBXL17Q9UF56 701 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
UBE3D-207ENST00000509102 ADAP1O75689 374 aa13.71□□□□□ -0.21
UBE3D-207ENST00000509102 S100A7P31151 101 aa13.71□□□□□ -0.21
UBE3D-207ENST00000509102 NKX2-1P43699 371 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-207ENST00000509102 LYZP61626 148 aa13.71□□□□□ -0.21
UBE3D-207ENST00000509102 ZNF90Q03938 601 aa13.71□□□□□ -0.21
UBE3D-207ENST00000509102 MORN3Q6PF18 240 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-207ENST00000509102 TRGV9Q99603 122 aa13.71□□□□□ -0.21
UBE3D-207ENST00000509102 SDHCQ99643 169 aaPredicted RBP13.71□□□□□ -0.21
UBE3D-207ENST00000509102 NUPR2A6NF83 97 aa13.7□□□□□ -0.22
UBE3D-207ENST00000509102 SPP1P10451 314 aa13.7□□□□□ -0.22
UBE3D-207ENST00000509102 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
UBE3D-207ENST00000509102 AKR1C1Q04828 323 aa13.7□□□□□ -0.22
UBE3D-207ENST00000509102 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
UBE3D-207ENST00000509102 PSMG4Q5JS54 123 aa13.7□□□□□ -0.22
UBE3D-207ENST00000509102 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
UBE3D-207ENST00000509102 ACTL10Q5JWF8 245 aa13.69□□□□□ -0.22
UBE3D-207ENST00000509102 C1orf194Q5T5A4 169 aa13.69□□□□□ -0.22
UBE3D-207ENST00000509102 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
UBE3D-207ENST00000509102 IGKV1D-37A0A075B6S9 117 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 H3BP45 60 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 LYRM1O43325 122 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 SSSCA1O60232 199 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 BTCP35070 178 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 NUTF2P61970 127 aaKnown RBP13.68□□□□□ -0.22
UBE3D-207ENST00000509102 ID3Q02535 119 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 OR2F1Q13607 317 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
UBE3D-207ENST00000509102 THAP8Q8NA92 274 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 C20orf85Q9H1P6 137 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 PSENENQ9NZ42 101 aa13.68□□□□□ -0.22
UBE3D-207ENST00000509102 CSMD3Q7Z407 3707 aa13.67□□□□□ -0.22
UBE3D-207ENST00000509102 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
UBE3D-207ENST00000509102 SCGB1D2O95969 90 aa13.67□□□□□ -0.22
UBE3D-207ENST00000509102 ID1P41134 155 aa13.67□□□□□ -0.22
UBE3D-207ENST00000509102 POLR2GP62487 172 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBE3D-207ENST00000509102 IAH1Q2TAA2 248 aaPredicted RBP13.67□□□□□ -0.22
UBE3D-207ENST00000509102 BPIFCQ8NFQ6 507 aa13.67□□□□□ -0.22
UBE3D-207ENST00000509102 CCDC32Q9BV29 185 aa13.67□□□□□ -0.22
UBE3D-207ENST00000509102 SMCO3A2RU48 225 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 SAMD13Q5VXD3 122 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 ACOT7LQ6ZUV0 252 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 OR8I2Q8N0Y5 310 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 OR4D5Q8NGN0 318 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 MITD1Q8WV92 249 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 RAB40CQ96S21 281 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 MFFQ9GZY8 342 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 C11orf68Q9H3H3 251 aaKnown RBP13.66□□□□□ -0.22
UBE3D-207ENST00000509102 KLK5Q9Y337 293 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-207ENST00000509102 STARD9Q9P2P6 4700 aa13.66□□□□□ -0.22
UBE3D-207ENST00000509102 DYNC2H1Q8NCM8 4307 aaKnown RBP13.66□□□□□ -0.22
UBE3D-207ENST00000509102 LINC00299Q6ZSB3 139 aa13.65□□□□□ -0.22
UBE3D-207ENST00000509102 SMIM8Q96KF7 97 aa13.65□□□□□ -0.22
UBE3D-207ENST00000509102 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
UBE3D-207ENST00000509102 GSKIPQ9P0R6 139 aa13.65□□□□□ -0.22
UBE3D-207ENST00000509102 SLC45A2Q9UMX9 530 aa13.65□□□□□ -0.22
UBE3D-207ENST00000509102 IGKV1OR2-108A0A075B7D4 117 aa13.64□□□□□ -0.23
UBE3D-207ENST00000509102 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
UBE3D-207ENST00000509102 TCRBP04435 133 aa13.64□□□□□ -0.23
UBE3D-207ENST00000509102 S100A7AQ86SG5 101 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms