RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 POU2AF1Q16633 256 aa4.33□□□□□ -1.72
APC-208ENST00000508624 GAGE13Q4V321 117 aa4.33□□□□□ -1.72
APC-208ENST00000508624 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
APC-208ENST00000508624 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
APC-208ENST00000508624 GHRHP01286 108 aa4.33□□□□□ -1.72
APC-208ENST00000508624 PLSCR4Q9NRQ2 329 aa4.33□□□□□ -1.72
APC-208ENST00000508624 DEPPQ9NTK1 212 aa4.33□□□□□ -1.72
APC-208ENST00000508624 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
APC-208ENST00000508624 IGHV3-21A0A0B4J1V1 117 aa4.32□□□□□ -1.72
APC-208ENST00000508624 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
APC-208ENST00000508624 SNRPD3P62318 126 aaKnown RBP4.32□□□□□ -1.72
APC-208ENST00000508624 RNF138Q8WVD3 245 aa4.32□□□□□ -1.72
APC-208ENST00000508624 LEAP2Q969E1 77 aa4.32□□□□□ -1.72
APC-208ENST00000508624 CACNA1EQ15878 2313 aa4.32□□□□□ -1.72
APC-208ENST00000508624 TRAV21A0A0B4J279 112 aa4.32□□□□□ -1.72
APC-208ENST00000508624 HGFACQ04756 655 aa4.32□□□□□ -1.72
APC-208ENST00000508624 Q6ZRM9 215 aa4.32□□□□□ -1.72
APC-208ENST00000508624 FGFBP3Q8TAT2 258 aa4.32□□□□□ -1.72
APC-208ENST00000508624 FAM57AQ8TBR7 257 aa4.32□□□□□ -1.72
APC-208ENST00000508624 SEPSECSQ9HD40 501 aaKnown RBP4.32□□□□□ -1.72
APC-208ENST00000508624 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
APC-208ENST00000508624 IGHV2-26A0A0B4J1V2 119 aa4.32□□□□□ -1.72
APC-208ENST00000508624 A0A0G2JRQ6 117 aa4.32□□□□□ -1.72
APC-208ENST00000508624 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
APC-208ENST00000508624 NDUFS8O00217 210 aa4.32□□□□□ -1.72
APC-208ENST00000508624 C19orf54Q5BKX5 351 aa4.32□□□□□ -1.72
APC-208ENST00000508624 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
APC-208ENST00000508624 C18orf32Q8TCD1 76 aa4.32□□□□□ -1.72
APC-208ENST00000508624 GEMIN7Q9H840 131 aaKnown RBP4.32□□□□□ -1.72
APC-208ENST00000508624 EPOPA6NHQ4 379 aa4.32□□□□□ -1.72
APC-208ENST00000508624 A8MWV9 139 aa4.32□□□□□ -1.72
APC-208ENST00000508624 OVOL1O14753 267 aa4.32□□□□□ -1.72
APC-208ENST00000508624 CFHR2P36980 270 aa4.32□□□□□ -1.72
APC-208ENST00000508624 LAGE3Q14657 143 aa4.32□□□□□ -1.72
APC-208ENST00000508624 RNASE2P10153 161 aaKnown RBP4.32□□□□□ -1.72
APC-208ENST00000508624 TAL2Q16559 108 aa4.32□□□□□ -1.72
APC-208ENST00000508624 GCSAMLQ5JQS6 135 aa4.32□□□□□ -1.72
APC-208ENST00000508624 KLF17Q5JT82 389 aaPredicted RBP4.32□□□□□ -1.72
APC-208ENST00000508624 IGHV3-72A0A0B4J1Y9 119 aa4.32□□□□□ -1.72
APC-208ENST00000508624 GAGE12BA1L429 117 aa4.32□□□□□ -1.72
APC-208ENST00000508624 SMAD7O15105 426 aaKnown RBP4.32□□□□□ -1.72
APC-208ENST00000508624 TFPI2P48307 235 aa4.32□□□□□ -1.72
APC-208ENST00000508624 KLF5Q13887 457 aaPredicted RBP4.32□□□□□ -1.72
APC-208ENST00000508624 PRSS8Q16651 343 aa4.32□□□□□ -1.72
APC-208ENST00000508624 KHDC1LQ5JSQ8 128 aa4.32□□□□□ -1.72
APC-208ENST00000508624 CEP290O15078 2479 aa4.31□□□□□ -1.72
APC-208ENST00000508624 DOCK7Q96N67 2140 aa4.31□□□□□ -1.72
APC-208ENST00000508624 PSPNO60542 156 aa4.31□□□□□ -1.72
APC-208ENST00000508624 PAX2Q02962 417 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
APC-208ENST00000508624 FNDC4Q9H6D8 234 aaPredicted RBP4.31□□□□□ -1.72
APC-208ENST00000508624 IGKV1-6A0A0C4DH72 117 aa4.31□□□□□ -1.72
APC-208ENST00000508624 CELA3AP09093 270 aa4.31□□□□□ -1.72
APC-208ENST00000508624 LTBRP36941 435 aa4.31□□□□□ -1.72
APC-208ENST00000508624 VDAC2P45880 294 aaPredicted RBP4.31□□□□□ -1.72
APC-208ENST00000508624 LGALS9BQ3B8N2 356 aa4.31□□□□□ -1.72
APC-208ENST00000508624 LGALS9CQ6DKI2 356 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ZNF329Q86UD4 541 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ZCCHC24Q8N2G6 241 aaKnown RBP4.31□□□□□ -1.72
APC-208ENST00000508624 NUP37Q8NFH4 326 aa4.31□□□□□ -1.72
APC-208ENST00000508624 DLX4Q92988 240 aaPredicted RBP4.31□□□□□ -1.72
APC-208ENST00000508624 RNF166Q96A37 237 aaPredicted RBP4.31□□□□□ -1.72
APC-208ENST00000508624 NHP2Q9NX24 153 aaKnown RBP4.31□□□□□ -1.72
APC-208ENST00000508624 TMEM14CQ9P0S9 112 aa4.31□□□□□ -1.72
APC-208ENST00000508624 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
APC-208ENST00000508624 V9GYV3 84 aa4.31□□□□□ -1.72
APC-208ENST00000508624 DNAL4O96015 105 aa4.31□□□□□ -1.72
APC-208ENST00000508624 SP9P0CG40 484 aa4.31□□□□□ -1.72
APC-208ENST00000508624 PYYP10082 97 aa4.31□□□□□ -1.72
APC-208ENST00000508624 FAM216BQ8N7L0 139 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ST6GALNAC3Q8NDV1 305 aa4.31□□□□□ -1.72
APC-208ENST00000508624 FBXL15Q9H469 300 aa4.31□□□□□ -1.72
APC-208ENST00000508624 SPANXCQ9NY87 97 aa4.31□□□□□ -1.72
APC-208ENST00000508624 FBXL7Q9UJT9 491 aa4.31□□□□□ -1.72
APC-208ENST00000508624 HILPDAQ9Y5L2 63 aa4.31□□□□□ -1.72
APC-208ENST00000508624 IGHV1-18A0A0C4DH31 117 aa4.31□□□□□ -1.72
APC-208ENST00000508624 A6NNC1 897 aa4.31□□□□□ -1.72
APC-208ENST00000508624 HAX1O00165 279 aa4.31□□□□□ -1.72
APC-208ENST00000508624 APOMO95445 188 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ZNF726P1Q15940 193 aa4.31□□□□□ -1.72
APC-208ENST00000508624 PSG3Q16557 428 aa4.31□□□□□ -1.72
APC-208ENST00000508624 OCIAD2Q56VL3 154 aa4.31□□□□□ -1.72
APC-208ENST00000508624 MINOS1Q5TGZ0 78 aa4.31□□□□□ -1.72
APC-208ENST00000508624 MINOS1-NBL1R4GNA1 71 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ADAMTS9Q9P2N4 1935 aa4.31□□□□□ -1.72
APC-208ENST00000508624 LTBP2Q14767 1821 aa4.31□□□□□ -1.72
APC-208ENST00000508624 LILRA1O75019 489 aa4.31□□□□□ -1.72
APC-208ENST00000508624 CELA3BP08861 270 aa4.31□□□□□ -1.72
APC-208ENST00000508624 APELAP0DMC3 54 aa4.31□□□□□ -1.72
APC-208ENST00000508624 SCGB1A1P11684 91 aa4.31□□□□□ -1.72
APC-208ENST00000508624 GATA4P43694 442 aa4.31□□□□□ -1.72
APC-208ENST00000508624 PEAR1Q5VY43 1037 aaPredicted RBP4.31□□□□□ -1.72
APC-208ENST00000508624 MUC15Q8N387 334 aa4.31□□□□□ -1.72
APC-208ENST00000508624 C18orf15Q96N68 181 aa4.31□□□□□ -1.72
APC-208ENST00000508624 ZNF407Q9C0G0 2248 aa4.31□□□□□ -1.72
APC-208ENST00000508624 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
APC-208ENST00000508624 IGKV3-15P01624 115 aa4.3□□□□□ -1.72
APC-208ENST00000508624 RPL15P61313 204 aaKnown RBP4.3□□□□□ -1.72
APC-208ENST00000508624 GNG5P63218 68 aa4.3□□□□□ -1.72
APC-208ENST00000508624 CST9LQ9H4G1 147 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms